| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4607 |
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| Symbol | |
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| ID | 1172190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4802272 |
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| End bp | 4803864 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346316 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | NP_720123 |
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| Protein GI | 24376080 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTC TGACTCAAGA TCAAATTGCC AGCCATGATG AACATCATCA CGGTGCACCT
AAAGGCATCA TGCGCTGGAT ACTCACGACT AACCATAAAG ATATTGGCAC CCTGTATTTA
TGGTTTAGCT TTATTATGTT TTTAACTGGT GGTGCGATGG CCATGGTGAT CCGCGCCGAA
CTATTCCAGC CCGGATTACA ACTCGTTGAA CCTAACTTTT TTAATCAGAT GACCACGGTT
CATGGACTGA TTATGGTGTT TGGCGCGGTA ATGCCAGCCT TTACAGGGCT AGCGAACTGG
CTGATCCCCA TGATGATTGG GGCACCTGAT ATGGCGCTAC CGCGGATGAA TAACTGGAGT
TTTTGGATCC TTCCCTTCGC CTTTACCATT CTGCTTAGCT CATTGTTTAT GGAGGGAGGC
GGCCCCAACT TTGGTTGGAC CTTCTATGCG CCACTCTCAA CCACCTATAG TCCCGATAGC
ACAGCGTTAT TTGTGTTCTC CATCCATATT ATGGGCATCA GCTCGATTAT GGGTGCGATC
AACGTGATCG TGACCATAGT CAACCTGCGC GCCCCAGGCA TGACTTGGAT GAAGTTACCG
CTATTCGTCT GGACTTGGTT GATTACCGCC TTTTTGCTTA TCGCCGTCAT GCCCGTACTC
GCGGGTGCGG TCACCATGGT ATTAACCGAT AAGTTTTTCG GCACTAGCTT CTTCGAGGCC
GCTGGTGGTG GCGATCCCGT GATGTTCCAG CATATTTTCT GGTTCTTCGG TCACCCCGAG
GTCTATATCA TGATTTTGCC GTCCTTTGGC ATCATATCCG CCATCGTTCC TGCCTTCAGT
CGCAAACCAT TATTCGGCTA TGCATCCATG GTGTATGCGA CTGCCAGTAT TGCGATTCTG
TCCTTCCTCG TGTGGGCGCA CCATATGTTC ACCACTGGTA TGCCGGTGTT TGCCGAGTTG
TTTTTCATGT ATTGCACTAT GTTGATTGCA GTACCCACCG GAGTAAAAGT GTTTAACTGG
GTGGCAACCA TGTGGCGTGG CTCCCTGAGT TTTGAAACCC CAATGTTATT CGCGGTGGCC
TTTATTATCC TGTTCACTAT TGGCGGCTTC TCTGGCTTGA TGCTCGCTAT AACCCCCGCT
GACTTCCAGT ATCACGACAC TTACTTTGTC GTAGCTCACT TCCATTATGT GCTGGTGACA
GGTGCAATTT TTTCCATTAT GGCGGCGGCC TATTACTGGC TCCCCAAATG GACCGGCCAT
ATGTACAGCG AAAGGTTAGG CCAGTGGCAT TTTTGGTGTT CAGTCATTTC GGTCAACGTG
TTGTTTTTTC CGATGCATTT CTTAGGTCTT GCGGGAATGC CAAGGCGTAT TCCCGACTAC
TCGATTCAAT TTGCCGATGT AAATCAAATC GTCTCGATTG GGGGTTTTGC TTTTGGTCTA
TCTCAGTTGA TCTTCCTCGT GCTGGTGATT AAGTGCATTC GGGGCGGTGA AAAGGCACCC
GCCAAACCAT GGGAAGGCAG CGAAGGCTTA GAGTGGACCC TACCAAGTCC AGCGCCCTAT
CACTCTTTCA CCACGCCACC CGAGGTGAAA TAA
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| Protein sequence | MSTLTQDQIA SHDEHHHGAP KGIMRWILTT NHKDIGTLYL WFSFIMFLTG GAMAMVIRAE
LFQPGLQLVE PNFFNQMTTV HGLIMVFGAV MPAFTGLANW LIPMMIGAPD MALPRMNNWS
FWILPFAFTI LLSSLFMEGG GPNFGWTFYA PLSTTYSPDS TALFVFSIHI MGISSIMGAI
NVIVTIVNLR APGMTWMKLP LFVWTWLITA FLLIAVMPVL AGAVTMVLTD KFFGTSFFEA
AGGGDPVMFQ HIFWFFGHPE VYIMILPSFG IISAIVPAFS RKPLFGYASM VYATASIAIL
SFLVWAHHMF TTGMPVFAEL FFMYCTMLIA VPTGVKVFNW VATMWRGSLS FETPMLFAVA
FIILFTIGGF SGLMLAITPA DFQYHDTYFV VAHFHYVLVT GAIFSIMAAA YYWLPKWTGH
MYSERLGQWH FWCSVISVNV LFFPMHFLGL AGMPRRIPDY SIQFADVNQI VSIGGFAFGL
SQLIFLVLVI KCIRGGEKAP AKPWEGSEGL EWTLPSPAPY HSFTTPPEVK
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