Gene SO_4603 details

Gene Information

• Locus tag: SO_4603
• Symbol: lexA
• ID: 1172187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4799182
• End bp: 4799802
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637346313
• Product: LexA repressor
• Protein accession: NP_720119
• Protein GI: 24376076
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACCCT TGACGCCACG CCAAGCTGAA ATTTTAGAGC TGATTAAACG TAATATTGCC 
GAAACAGGCA TGCCACCCAC TCGGGCCGAA ATAGCCACCC GCCTGGGTTT TAAAAGTGCA 
AATGCCGCTG AAGAACACCT TAAGGCACTG GCAAAAAAAG GCTGTATCGA GATCATGCCC 
GGCACATCCC GCGGGATCCG TCTCCCTGTT GAGGAAGAAG ATAACAGTGA AACGGGTCTT 
CCACTCATCG GTCAAGTAGC TGCGGGCGAA CCCATTCTCG CTCAAGAGCA CGTAGAACAG 
TATTACCAAA TCGATCCTAG TATGTTCCAC CCGACAGCCA ATTTCTTACT GCGCGTTAAG 
GGTGACAGTA TGAAAAATAT CGGCATCCTC GAAGGTGATC TGCTCGCCGT TCATAAAGTA 
CAACAAGCTC GCAATGGACA AGTCGTCGTT GCTCGCGTTG ACGATGATGT AACCGTCAAA 
CGCTTTGAAA AAAAAGGTAA TGTAGTCTAT CTACATGCCG AAAATGAAGA CTACTCACCC 
ATTAAAGTCG ATTTGAGTTT CCAAAGTTTA ACAATTGAAG GGCTCGCCGT AGGGGTGATC 
CGCAACGGAG ATTGGCTATG A 

 

Protein sequence

MRPLTPRQAE ILELIKRNIA ETGMPPTRAE IATRLGFKSA NAAEEHLKAL AKKGCIEIMP 
GTSRGIRLPV EEEDNSETGL PLIGQVAAGE PILAQEHVEQ YYQIDPSMFH PTANFLLRVK 
GDSMKNIGIL EGDLLAVHKV QQARNGQVVV ARVDDDVTVK RFEKKGNVVY LHAENEDYSP 
IKVDLSFQSL TIEGLAVGVI RNGDWL