| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4601 |
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| Symbol | mtr |
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| ID | 1172185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4795342 |
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| End bp | 4796586 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346311 |
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| Product | tryptophan-specific transport protein |
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| Protein accession | NP_720117 |
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| Protein GI | 24376074 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGG TAAAAAATAA GCCGGTAGGG AAGTCTCTGC TCGGTGGCGC CATGATTATT
GCGGGGACCA CTGTTGGGGC TGGGATGTTT TCATTGCCCG TTGTTGGCTC AGGCATGTGG
TTTGGCTATT CGATATTGAT GTTGCTGGGT ATTTGGTTTT GTATGTTGAT GTCGGGGCTG
TTACTGCTCG AAACCAATTT ACATTTCGAG CCAGGCGCAA GTTTCGATAC CCTCACCAAG
GAAACCCTAG GCCAGTTCTG GCGTATAGTG AACGGGGTTT CTATCGCCTT TGTGCTCTAT
ATCTTAACCT ACGCCTATAT CAGCGGTGGT GGTTCGATAG TAAACCATAG CCTACAGGGG
ATGGGGATTG AACTACCCCA AAGTGTTGCC GGATTAGTGT TTACCGTGGT GCTCGCCTGT
ATCGTGTTGA TTAGCACTAA GGCTGTCGAT CGCATTACAA CCATTATGCT AGGTGGGATG
ATCATCACTT TCTTCCTCGC GATTGGTAAT CTACTGATTG AGATCGATGT GACTAAGTTA
CTCGAGCCGG ATGGAAATCA ACGTTTTATA CCATATCTAT GGGTTGCATT GCCCTTTGGG
CTCGCCAGTT TTGGTTATCA TGGCAACGTG CCTAGCTTGG TGAAGTATTA CGGCAAAGAT
TCCTCTACCA TTATTAAGGC CATTTTTGTT GGTACTTTTA TCGCGTTGAT TATTTACGTT
TGTTGGTTAG TGGCGACTAT GGGCAATATT CCCCGCAGCC AATTTAGCGA GATTATTGCC
CAAGGTGGCA ATATGGGGGT GCTCGTCGGT GCGCTGTCAA AAGTGATGGA AAGTAGTTGG
TTAAACAGTA TGTTAACGCT ATTTGCCAAC TTAGCCGTCG CTTCATCTTT CCTAGGTGTC
ACACTCGGTT TATTCGATTA CCTAGCCGAT TTGTTTGGTT TTGATGATTC GCGCTCAGGC
CGGATGAAAA CCGCGATTGT TACCTTTGTG CCGCCAACAG TATTCGGTTT GTTATTCCCC
GATGGCTTTT TGATTGCTAT CGGTTTTGCT GCTTTAGCGG CAACCGTGTG GGCAGTGATA
GTGCCCGCGC TGATGGCTTA TAAGTCGAGG CAACTCTTTC CCAATCACCA AGGTTTTAGG
GTTTTTGGTG GCACGCCGCT GATTATCCTT GTGGTGTTGT TTGGTGTGGT GACGGGGGCT
TGCCATTTAC TGGCAATGGC GAATTTATTG CCGCAGTTTT CCTAA
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| Protein sequence | MNAVKNKPVG KSLLGGAMII AGTTVGAGMF SLPVVGSGMW FGYSILMLLG IWFCMLMSGL
LLLETNLHFE PGASFDTLTK ETLGQFWRIV NGVSIAFVLY ILTYAYISGG GSIVNHSLQG
MGIELPQSVA GLVFTVVLAC IVLISTKAVD RITTIMLGGM IITFFLAIGN LLIEIDVTKL
LEPDGNQRFI PYLWVALPFG LASFGYHGNV PSLVKYYGKD SSTIIKAIFV GTFIALIIYV
CWLVATMGNI PRSQFSEIIA QGGNMGVLVG ALSKVMESSW LNSMLTLFAN LAVASSFLGV
TLGLFDYLAD LFGFDDSRSG RMKTAIVTFV PPTVFGLLFP DGFLIAIGFA ALAATVWAVI
VPALMAYKSR QLFPNHQGFR VFGGTPLIIL VVLFGVVTGA CHLLAMANLL PQFS
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