Gene SO_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4600 
Symbol 
ID1172184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4794347 
End bp4795129 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID637346310 
Productantigen, putative 
Protein accessionNP_720116 
Protein GI24376073 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATTA CTCAGTACAC ACAAGGGCAA GCATGTTGGG TTGAATTGGC AAGCCATGAC 
TGGCTGGGCG CGCAGGCTTT TTACCATGCA TTGTTTGGTT GGAATACGGT AGAAATGCCG
ATCCCCATGG GGCATTTCTC GTTATTTAAT CTGCAAGGAG ACGATTTAGG GGCTATGTAC
CAAATTCCTC AATCTGAGTC TCAGACCCCA AGCCACTGGC GAATCTACTT CGCGGTGAAA
GATATCGACG CGAGCATCGC CGCAATCTTG GCCGCAGGTG GTCAGTTGCA TATAGGGCCT
CATGTGGTGG GTGATGCGGG TGTGATGGCG CAGGTGAGCG ATATAGAAGG CGCGCGCTTT
GCCCTATGGC AAGCGAAACA TCATTCCGGT TCGCGTCGGC AAGGGGAAGA AAATACGCTT
TGTTGGGTTG AGCTAGCCTG TCGCGAACCA AGTCATGAAG CGGACTTTTA CACTAAGGTG
TTTCCTTGGA CTTCCGTTTC CAGCCATGTG CCCGGCATTG ATTACACTGA ATGGCAAACA
GAGGGGCAAT CCATCGGCGG TATGATGCAG ATAATGTCCG AATGGGGAGA GGTTGCTGCC
CATTGGATGC CCTATTTTAG GGTGGCTGAT TGCGATGACA TTGCCGCCAA AGCACAGGCG
CTCGGGGCAC AACTGTGTGT GCCGCCGAGC GATATCCCTA ATGTGGGACG TTTTGCTGTC
ATTGCCGACG CTCAAGGTGC TACGTTTGCG ATAATTCACT TAGCGCATAA TGAAAATGAG
TGA
 
Protein sequence
MRITQYTQGQ ACWVELASHD WLGAQAFYHA LFGWNTVEMP IPMGHFSLFN LQGDDLGAMY 
QIPQSESQTP SHWRIYFAVK DIDASIAAIL AAGGQLHIGP HVVGDAGVMA QVSDIEGARF
ALWQAKHHSG SRRQGEENTL CWVELACREP SHEADFYTKV FPWTSVSSHV PGIDYTEWQT
EGQSIGGMMQ IMSEWGEVAA HWMPYFRVAD CDDIAAKAQA LGAQLCVPPS DIPNVGRFAV
IADAQGATFA IIHLAHNENE