Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4600 |
Symbol | |
ID | 1172184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4794347 |
End bp | 4795129 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637346310 |
Product | antigen, putative |
Protein accession | NP_720116 |
Protein GI | 24376073 |
COG category | [R] General function prediction only |
COG ID | [COG3324] Predicted enzyme related to lactoylglutathione lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGATTA CTCAGTACAC ACAAGGGCAA GCATGTTGGG TTGAATTGGC AAGCCATGAC TGGCTGGGCG CGCAGGCTTT TTACCATGCA TTGTTTGGTT GGAATACGGT AGAAATGCCG ATCCCCATGG GGCATTTCTC GTTATTTAAT CTGCAAGGAG ACGATTTAGG GGCTATGTAC CAAATTCCTC AATCTGAGTC TCAGACCCCA AGCCACTGGC GAATCTACTT CGCGGTGAAA GATATCGACG CGAGCATCGC CGCAATCTTG GCCGCAGGTG GTCAGTTGCA TATAGGGCCT CATGTGGTGG GTGATGCGGG TGTGATGGCG CAGGTGAGCG ATATAGAAGG CGCGCGCTTT GCCCTATGGC AAGCGAAACA TCATTCCGGT TCGCGTCGGC AAGGGGAAGA AAATACGCTT TGTTGGGTTG AGCTAGCCTG TCGCGAACCA AGTCATGAAG CGGACTTTTA CACTAAGGTG TTTCCTTGGA CTTCCGTTTC CAGCCATGTG CCCGGCATTG ATTACACTGA ATGGCAAACA GAGGGGCAAT CCATCGGCGG TATGATGCAG ATAATGTCCG AATGGGGAGA GGTTGCTGCC CATTGGATGC CCTATTTTAG GGTGGCTGAT TGCGATGACA TTGCCGCCAA AGCACAGGCG CTCGGGGCAC AACTGTGTGT GCCGCCGAGC GATATCCCTA ATGTGGGACG TTTTGCTGTC ATTGCCGACG CTCAAGGTGC TACGTTTGCG ATAATTCACT TAGCGCATAA TGAAAATGAG TGA
|
Protein sequence | MRITQYTQGQ ACWVELASHD WLGAQAFYHA LFGWNTVEMP IPMGHFSLFN LQGDDLGAMY QIPQSESQTP SHWRIYFAVK DIDASIAAIL AAGGQLHIGP HVVGDAGVMA QVSDIEGARF ALWQAKHHSG SRRQGEENTL CWVELACREP SHEADFYTKV FPWTSVSSHV PGIDYTEWQT EGQSIGGMMQ IMSEWGEVAA HWMPYFRVAD CDDIAAKAQA LGAQLCVPPS DIPNVGRFAV IADAQGATFA IIHLAHNENE
|
| |