Gene SO_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4590 
Symbol 
ID1172175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4784767 
End bp4785300 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID637346301 
Productisochorismatase family protein 
Protein accessionNP_720106 
Protein GI24376063 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTC ACAATCACAT GACAAAGACG GCATTGGTCA TTATTGATGT GCAAAACGAC 
TACTTTGTTG ATGGGGCTTA CCCGCAATGG CAAGTCAATG AGATGTTAGA ACGCACTTTG 
CATTGTGCAC AACAAGCGCA GCAACAGGGA ATGCCGATTA TTCTAGTGCA GCATATCGCC 
GATACAACTC AAGGTGTGGC TCCCTTTTTT AACCCGGGCA CCCAGGGGGT TGAAATTCAT 
CCCAAACTCT TGGCGCTTCT ACCTAATGCC TCCATCGTCG TTAAACAGTT TGCCGACAGT 
TTTGACAACA CAGAGCTGGC CAAGCAGCTG CAAGAAATGC AGATAACTCA CTTATTGTTA 
TGCGGCATCA TGACGCAAAA CTGCGTGACG CATACAGCCT TATCTCATTC AGCACTCGGC 
TATTCGGTCA AAATTATCAG TGATGCTTGT ACCGCTCCCA CACAAATGGT GCATCAAATC 
GCCCTTAGCG CCCTATCCCG CAGAGTTGAG TTAATTGATA GCAGATCTAT CTAG
 
Protein sequence
MTTHNHMTKT ALVIIDVQND YFVDGAYPQW QVNEMLERTL HCAQQAQQQG MPIILVQHIA 
DTTQGVAPFF NPGTQGVEIH PKLLALLPNA SIVVKQFADS FDNTELAKQL QEMQITHLLL 
CGIMTQNCVT HTALSHSALG YSVKIISDAC TAPTQMVHQI ALSALSRRVE LIDSRSI