Gene SO_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4574 
Symbol 
ID1172159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4768711 
End bp4769511 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID637346285 
Productalpha/beta fold family hydrolase 
Protein accessionNP_720090 
Protein GI24376047 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGC TGGCCCGTTA CGGGGAAGTC TCGCAGCCAA ACTTGGTCCT GATCCATGGT 
TTTTTAGGAT CTAAGGCCGA TTGGCTGCCT CTAATCCCTC AACTCAGCCA GCATTTTCAC
TGTATCTGCC TCGATTTACC CGGCCACGGC GACAATCAAC CAGAAATCGC ATCAATGCTC
ACTAATGGCT TCGACTTTTG TGTCCAAGAC ATTATCAACC GCCTCGATCG CCTCGGTATT
GAAGCGTTTT ACCTCTATGG GTATTCCCTC GGAGGCCGTA TTGCCTTGCA TCTTGCCAAG
GCTTACCCCA ATCGCGTGTT GAGTTTATGG CTAGAATCCT GTCATCCTGG GCTGACTAAT
ACCGAAGAAC AAGCCGCGCG CAGTAAGAAC GACCAACTGT GGGCTAAACG GCTACACAGC
TTAAGTAGCA GGGATTTTTT GCAGCTTTGG TATCAACAGG CCGTTTTTGC CGATATGTCA
GACAATGTGC GCAATACCTT GATAGCAAAA CGAGCGGCGC AGCTTGACCA ACATCCTAAG
CACGCACTCA AACATATCTT TTTGGCGACT TCACTTGCCC GCCAAGCTTC ACTTTGGGAT
CTACCAGCAA ACCTTGCCTG CGAGAGCCAT TTTTTTGCAG GCAGCCAAGA TGCTAAATTC
ACTGCGATCG CAAAGGAGTG GCAAGCCAAA CAACCTATAA TCTTGCATAG GATTGAGCAG
GCTGGACATA ACATACATCA AGCCAATCCT GCCGGATTAC TGGCCTGTAT AAGAAGTTTT
TTCGTCGAGC GCTTGCCTTA G
 
Protein sequence
MSTLARYGEV SQPNLVLIHG FLGSKADWLP LIPQLSQHFH CICLDLPGHG DNQPEIASML 
TNGFDFCVQD IINRLDRLGI EAFYLYGYSL GGRIALHLAK AYPNRVLSLW LESCHPGLTN
TEEQAARSKN DQLWAKRLHS LSSRDFLQLW YQQAVFADMS DNVRNTLIAK RAAQLDQHPK
HALKHIFLAT SLARQASLWD LPANLACESH FFAGSQDAKF TAIAKEWQAK QPIILHRIEQ
AGHNIHQANP AGLLACIRSF FVERLP