| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4571 |
|---|
| Symbol | |
|---|
| ID | 1172156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4765360 |
|---|
| End bp | 4766319 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637346282 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_720087 |
|---|
| Protein GI | 24376044 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGATT GCGATGTAAG AATTTTTTAC ATATTCAAAT CTCTTTATGA TAGTGGTAGT
GCAACATTTG TGTCGCAGCA ACATTCTGTA TCACCCTCAA AAGTGAGTCG TTATATTGCT
GAAATGAGAG AGGTCTATAA CGACTCGCTT TTTATTAGGA GGAAAACTCA CTTTGTTCCA
ACAAAAAAAG CGAGAGAAAT TTATCCTAAA ATTTGTGAGA TTATAGAGCT GATTGAAGGT
TTAAGCGCTA ATAGACATGA ACTTGAGGTA AAGAAAGAGT GCGTGATTGC TGTGCCTGCA
ACGCTGTGCG TAGGGCTTCC TGAACATCTA AACCGTGTTA TAAAGCAAGA AGGTTTGGAT
ATCAGTTTAA AAGTAATGTC CTCGCATAGG GAAATTTGTA CAAAAGTCAT CAATGGTGAA
ATATGTATTG CCATTACTAA TCGTGCCTGT ACGCAAACCA TGGATTGTAA TCCAAAACAT
TCAAATTTAC TGCATGTTGA ACCCATTAGT GTTGGTGAGC ATGTCTATGT CGTTTCAGCT
GCGACTGGCG CAATTTGGCA AGAAAAAATT TCGCTCGATA ATATTGCAAA ATATCCATTT
GTCGTTACTC AAGTTTCTGG ATTTAATGAT GAAAAAGATC CATTTGAGGT CTATTGTGAG
CAGCGCGGAC TTGCTTTAAA TGTCTTTTTA AAAACACAAA ATTTAGCCTC TATGATTGAA
GCGTTGATGT CTGAAAACAC TATTAGTTTT ATTGGACCTA ATAGTGCCGC CGCTTTTATC
GCTAAGGTGC CTTCACTGAG GGTTGAGAAA TTAGAAAATT GTGAATATCA AAGGTTACAT
GAAGCAATGC ATAAACCCAC ATATTCTATG ATTTACCTTA AGCGTAATAT TGATGTCATT
CCACCGTTGA TTAAAAGTGA GGTGTTGCGT TTTATTTCTG ATTCGGTTTG TGATTTTTAA
|
|---|
| Protein sequence | MQDCDVRIFY IFKSLYDSGS ATFVSQQHSV SPSKVSRYIA EMREVYNDSL FIRRKTHFVP
TKKAREIYPK ICEIIELIEG LSANRHELEV KKECVIAVPA TLCVGLPEHL NRVIKQEGLD
ISLKVMSSHR EICTKVINGE ICIAITNRAC TQTMDCNPKH SNLLHVEPIS VGEHVYVVSA
ATGAIWQEKI SLDNIAKYPF VVTQVSGFND EKDPFEVYCE QRGLALNVFL KTQNLASMIE
ALMSENTISF IGPNSAAAFI AKVPSLRVEK LENCEYQRLH EAMHKPTYSM IYLKRNIDVI
PPLIKSEVLR FISDSVCDF
|
|---|
| |