Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4563 |
Symbol | |
ID | 1172149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4759697 |
End bp | 4760521 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637346275 |
Product | hypothetical protein |
Protein accession | NP_720080 |
Protein GI | 24376037 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCCG CCGCGCTACT GAGTCGAGTT GATGAGTTAC CCCGTTTACC TAAAGCCATC AGTGAATTAC TTGAAGTCGT GAACGACGAC AATGCCACCG TAAAAAATAT TGCGACTAAG GTGTCGCGTG ATCCCTTAAT CAGTGCCAAG GTGCTCAGAT TAGCCAACTG CGCCTATTAC GGTCACAGTC GCGAGGTTGG CAGCATTGAT GAAGCCGTTG TGCGCCTAGG TATGCAAACT TTGCGTACCC TAGTGTTAGC ATCTGCGGTG ATGGGCGCGG TGCCTAAATG CAATGGCGTT GATTTGGCGC ATTTTTGGGG GCAAACCTTT GAAATCGCAC TCTATAGCCA AGAGATGGCT AAACGGTGTG GTGTTCAGCC CGATGAGGCT TTTACCTGCG GAATTCTCCA CCGTATTGGT GATTTATTGA TTGCGGCAAT TTCTCCAGAA GACGCTGAAA AAATTACCGA AGCGGTCGCG CAAGGTAAAG ATAAACATGC TTTTGAGCGT GAATTACTCG GTTACGACTC TCCTGATATT GGCGCCTTAT TGGCACAAAA CTGGAAGTTT ACCCCTGCAC TGGTGCAAGG CATTCTGTTT CAGGATCATC CCAAGGATTC AAATCCTTTT TCTAAACTGG CGGCATTGCT GTGTCTTGCC CATAAAGTGT TAGCGGATTG GGACACCATT GAGGATGACG ACAAAACCAG CTGGTTATCG CAACTTGCTA CCAAGAAAGG CTTAAAAATG GAGATGGGCG GGTTGCGAGT TAAGTTAATA GAGCTTAGAG GTGTCGGGTT TGAGATAGGA AAGGCGCTGG CTTAG
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Protein sequence | MDSAALLSRV DELPRLPKAI SELLEVVNDD NATVKNIATK VSRDPLISAK VLRLANCAYY GHSREVGSID EAVVRLGMQT LRTLVLASAV MGAVPKCNGV DLAHFWGQTF EIALYSQEMA KRCGVQPDEA FTCGILHRIG DLLIAAISPE DAEKITEAVA QGKDKHAFER ELLGYDSPDI GALLAQNWKF TPALVQGILF QDHPKDSNPF SKLAALLCLA HKVLADWDTI EDDDKTSWLS QLATKKGLKM EMGGLRVKLI ELRGVGFEIG KALA
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