Gene SO_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4563 
Symbol 
ID1172149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4759697 
End bp4760521 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID637346275 
Producthypothetical protein 
Protein accessionNP_720080 
Protein GI24376037 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCCG CCGCGCTACT GAGTCGAGTT GATGAGTTAC CCCGTTTACC TAAAGCCATC 
AGTGAATTAC TTGAAGTCGT GAACGACGAC AATGCCACCG TAAAAAATAT TGCGACTAAG
GTGTCGCGTG ATCCCTTAAT CAGTGCCAAG GTGCTCAGAT TAGCCAACTG CGCCTATTAC
GGTCACAGTC GCGAGGTTGG CAGCATTGAT GAAGCCGTTG TGCGCCTAGG TATGCAAACT
TTGCGTACCC TAGTGTTAGC ATCTGCGGTG ATGGGCGCGG TGCCTAAATG CAATGGCGTT
GATTTGGCGC ATTTTTGGGG GCAAACCTTT GAAATCGCAC TCTATAGCCA AGAGATGGCT
AAACGGTGTG GTGTTCAGCC CGATGAGGCT TTTACCTGCG GAATTCTCCA CCGTATTGGT
GATTTATTGA TTGCGGCAAT TTCTCCAGAA GACGCTGAAA AAATTACCGA AGCGGTCGCG
CAAGGTAAAG ATAAACATGC TTTTGAGCGT GAATTACTCG GTTACGACTC TCCTGATATT
GGCGCCTTAT TGGCACAAAA CTGGAAGTTT ACCCCTGCAC TGGTGCAAGG CATTCTGTTT
CAGGATCATC CCAAGGATTC AAATCCTTTT TCTAAACTGG CGGCATTGCT GTGTCTTGCC
CATAAAGTGT TAGCGGATTG GGACACCATT GAGGATGACG ACAAAACCAG CTGGTTATCG
CAACTTGCTA CCAAGAAAGG CTTAAAAATG GAGATGGGCG GGTTGCGAGT TAAGTTAATA
GAGCTTAGAG GTGTCGGGTT TGAGATAGGA AAGGCGCTGG CTTAG
 
Protein sequence
MDSAALLSRV DELPRLPKAI SELLEVVNDD NATVKNIATK VSRDPLISAK VLRLANCAYY 
GHSREVGSID EAVVRLGMQT LRTLVLASAV MGAVPKCNGV DLAHFWGQTF EIALYSQEMA
KRCGVQPDEA FTCGILHRIG DLLIAAISPE DAEKITEAVA QGKDKHAFER ELLGYDSPDI
GALLAQNWKF TPALVQGILF QDHPKDSNPF SKLAALLCLA HKVLADWDTI EDDDKTSWLS
QLATKKGLKM EMGGLRVKLI ELRGVGFEIG KALA