Gene SO_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4554 
Symbol 
ID1172140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4750361 
End bp4750954 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID637346266 
Producthypothetical protein 
Protein accessionNP_720071 
Protein GI24376028 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGCC ACTATTGCCC CACTTGCTGT TATCCGATGA ATGCGTGCTT ATGCTCCCAT 
CTACAGCAGA TAAAACCGCA GACGCAGCTG TTGGTATTGC AGCATCCCTC TGAAGTCGAA 
CATAAAAAGA ATAGTGTTAG GGTGCTAAGC CTGGTGATAC CCGATACTCA AGTGTATGTG 
GGTGAGTCTG AGGCGGATTT TGCTGCGCTG CGGGCGCAAT TAAGCCGATG TCAGCGCCCT 
ATCTATCTTG TGTATCCCTC AGAGCAGAGC GCGAGCGTTG AAAGCCAGTC TATATGCGTG 
GATTGTGTGC TGCTATTAAT CGATGGAACC TGGCGTAAAG CATTTAAAAT CTTGCAGTTA 
AATCCATGGT TGGCGCAATT TCCGGCGGTA CATTTGGCAC AGGGTTATGC GTCAAGATAT 
AAGATCCGCA AATCGAGCCG CAGCGATAGC CTATCAACCT TAGAGGCGAG CGCTTATATG 
CTCAAAGCAC TTGATGATGG TTTAGATGTA AGCCCGTTAT TGGCGGCGTT TGATGCTATG 
GTGGCGATGC GACTTCAGGC TATGCCCGCT GAGGTGAGGT TACGCTATGA TTAA
 
Protein sequence
MSRHYCPTCC YPMNACLCSH LQQIKPQTQL LVLQHPSEVE HKKNSVRVLS LVIPDTQVYV 
GESEADFAAL RAQLSRCQRP IYLVYPSEQS ASVESQSICV DCVLLLIDGT WRKAFKILQL 
NPWLAQFPAV HLAQGYASRY KIRKSSRSDS LSTLEASAYM LKALDDGLDV SPLLAAFDAM 
VAMRLQAMPA EVRLRYD