| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4547 |
|---|
| Symbol | |
|---|
| ID | 1172134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4743909 |
|---|
| End bp | 4744886 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637346260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_720064 |
|---|
| Protein GI | 24376021 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC CTCGCCGAAC CCAGATAAGT CTTGAAGACA CACCCTATTA CCATTGCTGT
AGTCGCGTGG TGCGGCGTGC ATTTTTATGT GGCGATGATG CCTATTCGGG GAAAAATTAT
GACCATCGCC GCGCTTGGGT AGAGTCATTA TTGTTTGAAC TTGGAGCCAT TTTTGCTATT
GATGTGGCAG CGTTTGCGGT GATGTCGAAT CATCTGCATG TGGTTTTTCG AATGGACATC
GAGACGGCAA ATCGCTGGAC TGACCGTGAA GTACTGGAGC AGTGGCATAA GTTGTTTAAA
GGCGATGAAT TAACGCAAAA ATTCGTTAAA GGTGAGTTGG TTGAACCTCA TCAAATACTC
AAGCTAAAAC ATTCAATCGC CATTTACCGC AGCCGTTTGT GCGATATTAG CTGGTTTATG
CGCTGCTTAA ATGAACCTAT CGCAAGGCAA GCAAATCAAG AAGATAACTG TACAGGTCGC
TTCTGGGAAG GACGGTTTAA ATCCCAGGCC TTACTGGATG AAGCCGCCGT GTTAGCCTGT
ATGACTTACG TTGATTTGAA TCCGATTAGA GCGCAATTGG CTGATACACC AGAACAATCC
GACCATACCA GTATTCAGCT ACGTATTCGG GCCGCATTAA AAGGTGAGCA GCCGAGCAAT
CTCCTGCCTT TTATTGGTAA CGAGTGTAAC AACCAACCTA ATGGTATTGC GTTTTCATTA
ACGGATTACC TTCAATTGGT AGATGATACT GGCCGAATTA TTCGCAACGA TAAACGTGGA
TACATCAGTG AAAATAGCGC CAACATACTG ATCAGATTAA ATATCCCCCA TGACAATTGG
CTCAAGCTGA CCACCGAGTT TGGAAAACTA TTTCACGGTC CAGTAGGCAC ATTACAAGAA
CTAACCGATT ACTGCGAACA TCTTGAAAAG CGACGACGGC ACTTTGCCGC AAGCTGCCAG
CACTTTCATA GTAACTGA
|
|---|
| Protein sequence | MPRPRRTQIS LEDTPYYHCC SRVVRRAFLC GDDAYSGKNY DHRRAWVESL LFELGAIFAI
DVAAFAVMSN HLHVVFRMDI ETANRWTDRE VLEQWHKLFK GDELTQKFVK GELVEPHQIL
KLKHSIAIYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC
MTYVDLNPIR AQLADTPEQS DHTSIQLRIR AALKGEQPSN LLPFIGNECN NQPNGIAFSL
TDYLQLVDDT GRIIRNDKRG YISENSANIL IRLNIPHDNW LKLTTEFGKL FHGPVGTLQE
LTDYCEHLEK RRRHFAASCQ HFHSN
|
|---|
| |