Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4543 |
Symbol | |
ID | 1172130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4740350 |
End bp | 4741276 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637346256 |
Product | hypothetical protein |
Protein accession | NP_720060 |
Protein GI | 24376017 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAT TACTCGGCAT TTTATTTATA CTGCTAAGCT CAAGTTTCAA TGTATATGCG CAATTACCGC AAGTAAGCGC AGGCAGCATT GAGCGACTCA CCAGTTTCCC TTCTGCCTTT GTTCCGCCTC GAAATATCGA TATTTGGTTA CCTGCGGGTT ACGATAAACA GCAACGTTAT GCCGTGCTGT ATATGCATGA TGGTCAAATG CTATTTGATG CGACAACAAG CTGGAATAAA CAGGAGTGGC AAATTGATGA GGTGGCATCG AGATTAATAA AAGCAGGAAA AACTCAACCT TTTATCGTGG TTGGAATCGA TAACGCAGGC GAAAATCGCC ATAGCGAATA CTTTCCACAG CAACCCTTTG AAAATCTGTC CCAAGCACAA CAAACTGCAC TTTATCAATT ACAACGCACC AAAAACCAAG CGCTATTTAG CCAGCAAGTG TACTCAGATC GCTACCTCAA ATTTCTAGTG ACAGAACTTA AGCCCTATAT TGATAGCCAT TACTCTGTTT ATACAGATGC CGCCCATACC TTTGTCATGG GATCGAGTAT GGGCGGATTA ATTTCACTGT ATGCGATCAG CGAATATCCT CATATTTTCG GTGGTGCGGC TTGCCTATCA ACTCACTGGC CAGGTACGTT TGAGCAGCAA AACAACCCTA TTCCGCCTGC ATTTTTTAAC TATATGCAGC AAAAACTCCC CGATCCTTCG ACACATAAAC TCTATTTTGA CCATGGAACG GCCACTTTAG ATGCCTGGTA TCCACAATTA CAAGCTAAAG CAGATAAGAT CATTGAGGCG AAAGGCTACA CAAGTCAGAA TTGGCAAAGC CTAATATTCG AAGGTGCCGA GCATAGTGAG CACGCTTGGG CGGCGAGGCT AGATATCCCA CTTATCTTTT TGCTCGCTTT AAAATAG
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Protein sequence | MMRLLGILFI LLSSSFNVYA QLPQVSAGSI ERLTSFPSAF VPPRNIDIWL PAGYDKQQRY AVLYMHDGQM LFDATTSWNK QEWQIDEVAS RLIKAGKTQP FIVVGIDNAG ENRHSEYFPQ QPFENLSQAQ QTALYQLQRT KNQALFSQQV YSDRYLKFLV TELKPYIDSH YSVYTDAAHT FVMGSSMGGL ISLYAISEYP HIFGGAACLS THWPGTFEQQ NNPIPPAFFN YMQQKLPDPS THKLYFDHGT ATLDAWYPQL QAKADKIIEA KGYTSQNWQS LIFEGAEHSE HAWAARLDIP LIFLLALK
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