Gene SO_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4543 
Symbol 
ID1172130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4740350 
End bp4741276 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID637346256 
Producthypothetical protein 
Protein accessionNP_720060 
Protein GI24376017 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAT TACTCGGCAT TTTATTTATA CTGCTAAGCT CAAGTTTCAA TGTATATGCG 
CAATTACCGC AAGTAAGCGC AGGCAGCATT GAGCGACTCA CCAGTTTCCC TTCTGCCTTT
GTTCCGCCTC GAAATATCGA TATTTGGTTA CCTGCGGGTT ACGATAAACA GCAACGTTAT
GCCGTGCTGT ATATGCATGA TGGTCAAATG CTATTTGATG CGACAACAAG CTGGAATAAA
CAGGAGTGGC AAATTGATGA GGTGGCATCG AGATTAATAA AAGCAGGAAA AACTCAACCT
TTTATCGTGG TTGGAATCGA TAACGCAGGC GAAAATCGCC ATAGCGAATA CTTTCCACAG
CAACCCTTTG AAAATCTGTC CCAAGCACAA CAAACTGCAC TTTATCAATT ACAACGCACC
AAAAACCAAG CGCTATTTAG CCAGCAAGTG TACTCAGATC GCTACCTCAA ATTTCTAGTG
ACAGAACTTA AGCCCTATAT TGATAGCCAT TACTCTGTTT ATACAGATGC CGCCCATACC
TTTGTCATGG GATCGAGTAT GGGCGGATTA ATTTCACTGT ATGCGATCAG CGAATATCCT
CATATTTTCG GTGGTGCGGC TTGCCTATCA ACTCACTGGC CAGGTACGTT TGAGCAGCAA
AACAACCCTA TTCCGCCTGC ATTTTTTAAC TATATGCAGC AAAAACTCCC CGATCCTTCG
ACACATAAAC TCTATTTTGA CCATGGAACG GCCACTTTAG ATGCCTGGTA TCCACAATTA
CAAGCTAAAG CAGATAAGAT CATTGAGGCG AAAGGCTACA CAAGTCAGAA TTGGCAAAGC
CTAATATTCG AAGGTGCCGA GCATAGTGAG CACGCTTGGG CGGCGAGGCT AGATATCCCA
CTTATCTTTT TGCTCGCTTT AAAATAG
 
Protein sequence
MMRLLGILFI LLSSSFNVYA QLPQVSAGSI ERLTSFPSAF VPPRNIDIWL PAGYDKQQRY 
AVLYMHDGQM LFDATTSWNK QEWQIDEVAS RLIKAGKTQP FIVVGIDNAG ENRHSEYFPQ
QPFENLSQAQ QTALYQLQRT KNQALFSQQV YSDRYLKFLV TELKPYIDSH YSVYTDAAHT
FVMGSSMGGL ISLYAISEYP HIFGGAACLS THWPGTFEQQ NNPIPPAFFN YMQQKLPDPS
THKLYFDHGT ATLDAWYPQL QAKADKIIEA KGYTSQNWQS LIFEGAEHSE HAWAARLDIP
LIFLLALK