Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4537 |
Symbol | |
ID | 1172125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4728580 |
End bp | 4730607 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637346252 |
Product | peptidase, putative |
Protein accession | NP_720055 |
Protein GI | 24376012 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCA CGCTATCGGC TCTGGTGTTG GCCATGGGAC TTTTAAATCC CCTGAGCCAA GCACAGGCCA CCACGGCAGA AGACATCAAG AGTTTTACAC TCGCCAATGG TATGAAAATC ATGGTGCTAG AGGACTCTTC TATTCCCAAT GCCAATATGT ATCTGTTTTG GAAAGTCGGT TCCCGTAATG AAGTCCCTGG CATTACTGGT ATCTCACACT TTTTCGAGCA TATGATGTTT AACGGCTCGA AAAAATACGG CCCGAAGATG TTCGACCGTA CGATGGAAGC AGAGGGCGGC GCTAACAATG CCTATACCAC AGAGGATATG ACGGTTTACA CCGATTGGTT CCCCGCTAAT GCGCTAGAAA CCATGTTCGA CCTTGAAGCC GATCGTATCG CTAACTTGGA TATCAATCCT GAAATGGTGG AAAGCGAGCG TGGCGTGGTG CAGTCGGAGC GTTCGACTGG GCTTGAAAAC TCCAACTGGA ATACCCTCGA AGGCGAAATT AAAGGCGTAG CGTTTTTAGC GCACCCTTAC TCTTGGTCTG TGATTGGTCA TGAGTCGGAT ATCGCCGCGT GGACGCTAGA AGATTTAGTG CAATACCATA AGACCTATTA CGCGCCAAAC AACGCTGTGG TGGTGATTGC GGGCGATGTG AAGCTTGCCC AAGTAAAAGC CTTGGCCGAC AAGTACTTTG CGCCTATTCC TGCACAAACT CCGCCTAAAG CGATTCGTAC TGTGGAGCCT GAGCAAAAGG GTGAGCGCCG TACCTTTGTA CAAAAAGCCT CGGTCAGTAC GCCTAATGTG ATGCTGGCTT ACCATATTCC GGCGGCGACT CACGCAGATT TTTATGCGCT GGATTTATTA AGCTCGATTT TAAGCCAAGG TAATAGCTCG CGTTTATATC AAGCGCTGGT GGATAAACAA GTGGCCTTAG AAGCGCAAAC TTATATGCCG ATGTCGGTCG ATCCCAATCT CTTTTACGTC ATGGGTGTGG CTACGCCAGA GGTGAAAGCA TCGACGCTAG AGCGGGCGCT GATTGAACAA ATTGATGCGA TTGCGACCAA TGGCGTTAGC CAGCAAGAGC TAGATAAAGT TAAAAATATC AAGTTGATGG ATTTTTACCG CGCGATGGAA ACCATTAATG GCAAGGCCAA CACCATCGGC ACCTATGAAA TGTATTTTGG CAGTTACGAC AAGTTATTTA ATGCGCCAGA AGCCTATAAC AAGGTCACGA GCGCGGATAT CCAACGTGTT GCCCAAACTT ATTTACGCAA ATCGAATCGC ACGGTAGCGG TATTGGCGGC AAACGAGGAG AACTCTCAAT GA
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Protein sequence | MKKAGILLLS LLMPFSTAFA EASKPLSVEL LWQLKRIGSP VVSSTGEHII APVTEYDLKE DKGSTQLWRF DVEGKNNRAI TAKGLKVSEP VFSPDGKTLA FISERNDDDA GQIYLLPMDG PGEAAKLTDI PTGVNGIKWV GKHLYFISNI FPEQNWEQMK AQLKTDKDNK VSARQWNALP YSQFDHWLDE RRQAHVFRIP ATGGTVEAVT QPLGHELPRS SQSSESYDIS PDERLIAFSA YGSDNRVDPK LDLFLATIGG NKAENITPEN PAPDLNPSFS PNGKTLAFTR QKIPGFYADT ARLMLLDVSS RKLTTLTPDW DRSVSEFEWT PDSKGFYASI EDAATNRIYH IDAKSGKAKA ITQATDFSQP AIAKDGQLIA TNQSFLYPAR LVSINPRNGK TERLEQFNDD ILKDVDLGTY ESVTYKGYQG QDIQMWVHYP PGFDRSKKYP LFMLIHGGPH NAISDGFHYR WNAQTFASWG YVTAWPNFHG SSGFGQDFAD AINPDWKNKS LEDVLKATDW FKQQSWIDSD RMVAGGASYG GYLTSIILGQ PHPFKALLIH AAVYDMYAQM SADFAVHSTR FGNYWDNPEL YKAISPHYFA ANFNTPTLVS HGQLDYRVPV GQGFELFRTL QTRNVESRMI YFPDENHWIV KPNNSIYWYN QVKDWMAHYA KPGAQ
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