Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4533 |
Symbol | |
ID | 1172122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4726645 |
End bp | 4727124 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637346250 |
Product | ISSod10, transposase OrfA |
Protein accession | NP_720052 |
Protein GI | 24376009 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATC CAGACATTGC TGCATTAGTT AAATCCGAGA AAAGCGCACG TAAACGGATC CGCTATCTCG CTCTGCTTCA CTTCACAGAA GGTCATTCCC GTACTGCTAT CGCCAGTATG TTGAAGGTCA GCAGAACCAG TGTGAATAAG TGGGTCTCCA CTTATCTTTC CTTGGGACTG TCCGGCCTAA ATGACAAGCC AAATCCGGGA CGTCCCGCTA AATTGTCCTC CTCGCAACTA GCAACCCTAG CAGAATTCGT CCAGCTCAAA AGTCTATCTG AGCAAGGTGG CAGACTAATG GCCAAGGATG TCGGCGACTT TATCCAGTCT GAATTTGGCG TGACTTTCAA GCAAACTAAT CTCTACCGTT TACTACATCA ATTAGGCTTT TCGTGGATCA CTACGAGAGC ACGTCATCCG AAGCAATCTG AAGCTGTGCA AGAGTCTTTT AAAAAACTTC CCAATGGCAA TGATCCTTAA
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Protein sequence | MSHPDIAALV KSEKSARKRI RYLALLHFTE GHSRTAIASM LKVSRTSVNK WVSTYLSLGL SGLNDKPNPG RPAKLSSSQL ATLAEFVQLK SLSEQGGRLM AKDVGDFIQS EFGVTFKQTN LYRLLHQLGF SWITTRARHP KQSEAVQESF KKLPNGNDP
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