Gene SO_4514 details

Gene Information

• Locus tag: SO_4514
• Symbol: fdhB-2
• ID: 1172106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4708507
• End bp: 4709076
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637346234
• Product: formate dehydrogenase, iron-sulfur subunit
• Protein accession: NP_720034
• Protein GI: 24375991
• COG category: [C] Energy production and conversion
• COG ID: [COG0437] Fe-S-cluster-containing hydrogenase components 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACAA TGAAATTTTT GTGTGATACC AAGCGCTGCA TCGAATGTAA CGGTTGTGTC 
ACTGCTTGTA AAAACGAAAA CGACTCCGCG CTCGAATGGG GTATCCAACG CCGCCGCGTC 
GTGACCATCA ATGATGGTAA ACCCGGTGAA GCGTCAATCT CTGTCGCTTG TATGCATTGT 
TCAGACGCGC CTTGTATGGC TGTTTGCCCA GCAAACTGCT TCTACAAAAC CGAAGATGGC 
ATCGTACTGC ACGACAAAGA TACCTGTATT GGTTGTGGTT ATTGTTTGTA TGCCTGTCCT 
TTTGGCGCAC CACAGTTCCC ACAAAAAGGG GCCTTTGGTA ACCGCGGCAA GATGGACAAA 
TGTACCTTCT GTGCTGGCGG CCCAGAAGAA ACTCACTCAG AGGCAGAGCG CCAGAAGTAC 
GGTTCAAACC GTATTGCTGA AGGCAAACTA CCAATGTGTG CAGAACTATG TGCCACTAAA 
GCCCTGCTCG CTGGTGATGC TGAAGTTGTT TCTAACATCT TCCGTGAGCG CGTGGCTTAC 
CGTGGTGCTA AAAACGCGGC TTGGAATTAA 

 

Protein sequence

MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGKPGE ASISVACMHC 
SDAPCMAVCP ANCFYKTEDG IVLHDKDTCI GCGYCLYACP FGAPQFPQKG AFGNRGKMDK 
CTFCAGGPEE THSEAERQKY GSNRIAEGKL PMCAELCATK ALLAGDAEVV SNIFRERVAY 
RGAKNAAWN