| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4509 |
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| Symbol | |
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| ID | 1172101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4700477 |
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| End bp | 4703326 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637346229 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | NP_720029 |
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| Protein GI | 24375986 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTAA CCCGCAAAAC AGACCCAGTT GTCGAGCCCA AAGTGCCCGC CCTCGGTCTC
AATCGTCGCC AATTTTTAAA ATCCGCAGGT CTTGCCACGG GTGGTATTGC TGCGGCTTCA
ATGCTTGGCA CAGGCATGAT GCGTAAAGCA GAAGCTAAAG ATATCCCCCA CAATGCGCCA
ACTGAAGTCA AGCGTACCAT TTGCTCTCAC TGCTCAGTAG GTTGTGGTGT GTATGCAGAA
GTGCAAAATG GCGTGTGGAC AGGCCAAGAA CCTGCATTTG ACCACCCCTT CAACCAAGGC
GGTCACTGTG CTAAAGGGGC TGCGCTGCGT GAACACGGCC ATGGTGAAAA ACGCCTTAAA
TACCCAATGA AATTAGAAGG CGGCAAGTGG AAGAAGATCT CTTGGGATCA GGCCATCAAT
GAAGTAGGCG ATAAAATGAT GGCGATTCGT CAAGAATCAG GTCCTGACTC TATCTACTTT
ATGGGTAGTG CTAAGTTTTC TAACGAACAG GCTTATTTAT ATCGCAAATT CGCGGCACTG
TGGGGCACAA ACAACGTCGA CCACTCAGCC CGCATTTGTC ACTCTACCAC AGTAGCCGGT
GTTGCAAACA CATGGGGCTA CGGTGCGCAA ACCAACTCAG TTAACGATAT TCGCCACTCA
AAATGTATCT TATTTGTTGG TTCTAACCCC AGTGAAGCGC ACCCTGTCGC TATGCAACAC
ATTTTGGTAG CTAAAGAGCG CGGCGCCAAA ATTATCGTAG TTGATCCTCG TTTCACCCGT
ACTGCAGCGA AATCTGACGA GTACGTGCAT ATCCGCCCAG GTACCGATAT TCCGTTTATC
TATGGCCTGT TATGGCACAT TTTTGAAAAT GGCTGGGAAG ATAAAGACTT TATCAAGCGC
CGCGTTTACG GCATGGAACG TATCCGCGAA GAAGTGAAAA AGTATACTCC AGAAGAAGTT
GAAAACGTGG TGGGCGCGCC TAAGGCACAA ATGTATCGCG TCGCTAAGAT GATGGCTGAA
ACGAAACCCG GTAGCATTGT ATGGTGCATG GGTGGCACTC AACACCACGT TGGCAACGCT
AACACCCGCT CGTACTGTAT TTTACAGTTA GCGCTGGGCA ACATGGGTGT TACAGGTGGT
GGCACTAACA TTTTTCGTGG TCACGATAAC GTCCAAGGCG CTTCAGACTT TGGCCTATCG
TTTGACGACT TACCCGGCTA CTTCGGTTTA ACGTCTGGTT CCTGGGCTCA CTGGGCAAAC
GTATGGGACT TAGATCCTAA GTGGGTCACA AGCCGTTTTG ATCAAGGTGA GTACTTAGGT
CAGTCTCCCC AAACCTCTCC TGGGATCCCA TGTTCTCGCT GGCACGATGG TGTACTGGAA
GATAAAACCA AGATCGCACA GAAGGATAAT ATCCGTTTAG CGTTCTTCTG GGGCCAATCG
GTCAACACCG AAACTCGTGG CCGCGAAGTA CGTCAAGCAT TGGATAAAAT GGATACAGTG
GTAGTTGTCG ACCCATTCCC AACCATGGCT GGTGTAATGC ACCAACGTAA AGATGGTGTG
TATCTGTTAC CTGCTGCGAC CCAATTTGAA ACCTATGGCT CAGTCTCTGC AACTAACCGC
TCAATTCAAT GGCGCTCTAA AGTGATTGAG CCACTGTTTG AATCACTGCC AGATCACGTG
ATTATGTGCA AACTTGCTAA AAAGGTGGGG ATTGATAAAG AGCTATTCAA GCATATTAAG
GTCAATGGTG AAGAACCGCT GATTGAAGAT ATTGTCCGTG AATACAACAG AGGTATGTGG
ACAATTGGCT ACACAGGTCA AAGCCCTGAG CGTTTAAAAA TGCACCAAGA AAACTGGGGC
ACATTTAATG TTGATAGCTT AGAAGCACCT GGTGGCCCAG CCAAAGGTGA GACCTATGGT
TTGCCTTGGC CATGCTGGGG TACGCCAGAG ATGAAACACC CTGGCTCCCA CATTTTGTAT
AACGAAACAA AGCATGTTAA AGACGGTGGT GGCTCTTTCC GCGCCCGCTT TGGTGTCGAG
CGAAATGGCG TCAATCTTCT TTCAGAAGAA GCTTACTCTG CGGGTAGTGA AATCCAAGAT
GGTTATCCTG AATTTACCGC TGACATGCTC AAGCAATTGG GTTGGTGGGA TGATTTAACC
GAAGACGAGA AAAAATACGC TGAAGGAAAA AACTGGAAAA CAGATATTTC TGGCGGTATT
CAACGTGTTG TCATTAAGCA TGGCTGTATT CCCTATGGCA ATGGTAAGGC CCGCGCGGTG
GTATGGAATT TCCCCGATGA TATCCCGCTG CACCGCGAAC CACTTTACAC TCCTCGTCGA
GACTTAGTCG CTAAGTACCC AACCTACGAA GACCGTATGG TTGCACGTCT ACCGACGCTT
TATAAGTCCA TTCAGGACAA GGACTTTGCC AAAGACTTCC CACTGGCGCT CACATCGGGT
CGTTTAGTGG AATACGAAGG CGGTGGTGAA GAAACTCGCT CTAACCCTTG GTTAGCTGAG
CTACAACAAG AAATGTTTAT CGAAATAAGC CCGGCAGACG CTGCTGACCG TGGTATCCGT
GACGGTGACA ATGTCTTTGT TCATAGCCCT GAAGGCGCCA AGATCACAGT GAAGGCAATG
GTGACACCAC GGGTTGTTCC GGGTGAATGT TTTATGCCGT ACCACTTCGC AGGGGTATTT
GAAGGTGAAA GCCTTGCGAA AAATTATCCT GAAGGCACAG TGCCTTACGT GATAGGCGAA
TCAGCAAACA CCATTTTAAC TTATGGCTAT GACGTTGTGA CTCAGATGCA AGAAACTAAG
TCCAGCCTCT GCCAAATAAG CAAAGCCTAA
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| Protein sequence | MRLTRKTDPV VEPKVPALGL NRRQFLKSAG LATGGIAAAS MLGTGMMRKA EAKDIPHNAP
TEVKRTICSH CSVGCGVYAE VQNGVWTGQE PAFDHPFNQG GHCAKGAALR EHGHGEKRLK
YPMKLEGGKW KKISWDQAIN EVGDKMMAIR QESGPDSIYF MGSAKFSNEQ AYLYRKFAAL
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSVNDIRHS KCILFVGSNP SEAHPVAMQH
ILVAKERGAK IIVVDPRFTR TAAKSDEYVH IRPGTDIPFI YGLLWHIFEN GWEDKDFIKR
RVYGMERIRE EVKKYTPEEV ENVVGAPKAQ MYRVAKMMAE TKPGSIVWCM GGTQHHVGNA
NTRSYCILQL ALGNMGVTGG GTNIFRGHDN VQGASDFGLS FDDLPGYFGL TSGSWAHWAN
VWDLDPKWVT SRFDQGEYLG QSPQTSPGIP CSRWHDGVLE DKTKIAQKDN IRLAFFWGQS
VNTETRGREV RQALDKMDTV VVVDPFPTMA GVMHQRKDGV YLLPAATQFE TYGSVSATNR
SIQWRSKVIE PLFESLPDHV IMCKLAKKVG IDKELFKHIK VNGEEPLIED IVREYNRGMW
TIGYTGQSPE RLKMHQENWG TFNVDSLEAP GGPAKGETYG LPWPCWGTPE MKHPGSHILY
NETKHVKDGG GSFRARFGVE RNGVNLLSEE AYSAGSEIQD GYPEFTADML KQLGWWDDLT
EDEKKYAEGK NWKTDISGGI QRVVIKHGCI PYGNGKARAV VWNFPDDIPL HREPLYTPRR
DLVAKYPTYE DRMVARLPTL YKSIQDKDFA KDFPLALTSG RLVEYEGGGE ETRSNPWLAE
LQQEMFIEIS PADAADRGIR DGDNVFVHSP EGAKITVKAM VTPRVVPGEC FMPYHFAGVF
EGESLAKNYP EGTVPYVIGE SANTILTYGY DVVTQMQETK SSLCQISKA
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