Gene SO_4487 details

Gene Information

• Locus tag: SO_4487
• ID: 1172082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4674187
• End bp: 4674849
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637346203
• Product: DNA-binding response regulator
• Protein accession: NP_720008
• Protein GI: 24375965
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTAC TGCTGATTGA AGATGATATC GACTTAGTGG CTCGCCTTAT TCCCGCACTT 
AACAAAGCGG GCTATACGGT TGAACACGCC GATAACGGCA TCGATGGCGC CTTTCTGGGC 
GAGGAAGAAG CATTTGAGGC TGTGATCCTC GACTTAGGAT TGCCCGGTAA GCCGGGCTTA 
AGCGTGCTAA GTCACTGGCG TCAAAAAGGC TTGGCTATGC CCGTCCTTAT CCTTACCGCC 
CGCGATGCGT GGCACGAACG CGTTGATGGC CTCAAGGCCG GCGCCGATGA TTATCTTGGC 
AAGCCTTTTC ATGTTGAAGA GTTACTTGCC AGATTAGAAG CGCTGATCCG CCGCCACTTT 
GGCCGTGCCG ATAACCTACT GCAACACGCC GGCGTCTCCC TCGATGTTGA TAAACAAACC 
GCCACCAATG CCGAAGGGGA AGTTATCGAA CTCACTAAGA TTGAATACCG CTTGCTGCAT 
TACTTAATGG CCAATCCCAG CAAAATAGTC TCTAAGTCCG AACTCAGTGA ACGAATTTAC 
GAAGAAGATC AAATCAAAGA CAGCAATGTG ATTGAAGTGT ACGTTAACCG ACTTCGCCAA 
CGCTTAGGCA AGGATTATAT TGAGACTCGC CGCGGCCAAG GCTATCGACT CAAGGATGCA 
TAA 

 

Protein sequence

MRLLLIEDDI DLVARLIPAL NKAGYTVEHA DNGIDGAFLG EEEAFEAVIL DLGLPGKPGL 
SVLSHWRQKG LAMPVLILTA RDAWHERVDG LKAGADDYLG KPFHVEELLA RLEALIRRHF 
GRADNLLQHA GVSLDVDKQT ATNAEGEVIE LTKIEYRLLH YLMANPSKIV SKSELSERIY 
EEDQIKDSNV IEVYVNRLRQ RLGKDYIETR RGQGYRLKDA