Gene SO_4468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4468 
Symbol 
ID1172062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4656754 
End bp4657350 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content44% 
IMG OID637346183 
ProductTetR family transcriptional regulator 
Protein accessionNP_719989 
Protein GI24375946 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG AAACCCAATC TACCCGTCAG CATATTCTCG ATATCGGTTA CTCACTGATC 
ATTAAACAAG GCTTTTCATG CTTGGGGTTA GCCCAATTAC TCAAGGCAGC TGAAGTACCA 
AAAGGCTCGT TTTACCATTA CTTTAAATCC AAAGAGCAAT TCGGTGAGGC ATTATTAACG 
GGCTATTTTG AGCAATATCA AGTAGAGCTT GATAGCTTAT TTGCCAACCC ACAGCTCTCT 
GGCTTTGATC GCCAAATGCA ATATTGGCAA AAGTGGCTGC ATGTCCAACA AGATGGCTGC 
ATCGACCAAA AATGCTTAGT GGTTAAATTA AGTGCCGAGG TGGCTGATCT GTCTGAGGCT 
ATGCGCCTTG TTCTGTTAAA GGGTTCTGCA GGCATTATTG AACGCTTAAC GCACTGTATT 
CAAGATGGTA TTGAAGATAG CTCCATCTGT AATCAGGATG CCCAAGCAAC GGCAGAGCTG 
CTATATCACA TGTGGCTCGG CGCAAGTTTG ATGAATAAAC TCGGCCACAG TCATGTGGCA 
TTAACGCGCG CTCTTGTAAC AACTGAATCC ATTTTGAAGC ATAAAACGGT GTGCTAG
 
Protein sequence
MKTETQSTRQ HILDIGYSLI IKQGFSCLGL AQLLKAAEVP KGSFYHYFKS KEQFGEALLT 
GYFEQYQVEL DSLFANPQLS GFDRQMQYWQ KWLHVQQDGC IDQKCLVVKL SAEVADLSEA 
MRLVLLKGSA GIIERLTHCI QDGIEDSSIC NQDAQATAEL LYHMWLGASL MNKLGHSHVA 
LTRALVTTES ILKHKTVC