| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4445 |
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| Symbol | |
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| ID | 1172042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4632770 |
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| End bp | 4636195 |
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| Gene Length | 3426 bp |
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| Protein Length | 1141 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637346163 |
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| Product | response regulator/sensor histidine kinase |
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| Protein accession | NP_719966 |
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| Protein GI | 24375923 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAA TTCAAAAAAT ACGTTATCAA CTTCTTTGCA TCTTGAGTTA CTTACCCCTA
CTGTGCATGA CTTTTATCAC TCATGCTGAA CAGCCCAACA CCACAACAAT TAGCGTAGGC
GTACTCGCCA ATGGCTGGGG ACCTTTTCAG CAAGTAAATG ACCAGATAAC AACGGGATTT
AGTGTTGAGC TGATACAACT GCTCGCCAAA AATCTTCATT ACCAAATTGA CTGGAAGATT
TATCCCGATT GGATGAGCCT CTACTCCGCA GGTTGTAATG GGGAGGTCGA TGTCTTGCTT
GACGCTTTTC GTACCACAGA GCGCACTCAA TGTCTCATGT TTAGCCGCTC ATATTACACC
TCACCCACCG TCGTCGTTAT TCGTTACGAC AGCCGATTTT TTCGCGATGT GAGTGAATTT
GGCCAAGCTC GGATCGCCGT TGAAAAAGGA TTCTCGACTG AGAAATTAGT CAAACTGCAT
TATCCAACCG TAACAGAAGT AACATTTTCT AATACAGAAC AAGCACTTTC CTCGGTCATT
GATAAAACGA CCGATGCCTA TATTGGTAAT CTTCATGTTG CTAACCAATA TATTAGTGCA
CACCCAGAAC TTCTTATCGT TGCCCAAGCC CCCCTGATGA TGGAAAACTT ACATTTAGGG
ATCACGAAGA ACAATAGCCT GCTTGTAACA CAACTCGATA ACGCCTTAAT GGCTCTGAGT
GTAGAAGAGC GTAATGCTCT CGAAGTGACT TGGCTGGGTA TGGGCGATCT TCATTTTTTA
GGCCACAGTA ATTTTCTACT TAGACCCAAT GAACGCGAAT GGCTAGCAGG TTTACCTTCA
CTCAGAGTCG GATTTGTTGA TGATTGGATG CCATTCTCTT CGGTTAACAA TAACGGCATC
TTAGTAGGCT TAATTGCTGA TTATCTTGAG CAATTTAGAG AAAAACTTGG GTTAGATTAT
GCGGCACAAA AAACCAGAAC CTGGAATGAG ATCCAAAGCG CACTCATTAA CCATGAGATT
GATCTCGCCA TTATTCCAAC TCGATTGAAA GCACAATATC CAGACTGGCA CATGAGCGAA
GTGTTTACGT CTTTCCCTAT TGTGATAGCC ACTGCTCGCA ACAGTCCGCG AATCGCGGGG
CTGTCAGAAC TCAACTTTCA ACGCGTGGTC ATCACAGATA ATCTACTGCT GCCAAGCATT
AAAAAAGCCT ATCCGAATAT CGATGTTGTA GTTTCTGCCA ATCCCGATGA AGGTTTGACC
TTAGTCGCAA AGGGCAACGC AGCGGCTTAT ATGGGGAATT TGGCCGTTGT GGCTATGCTC
ATTGACAACA AATTTATTGA TGAATTACGA GTAGCGGCAC CAACACCTTA TAAAGATGAA
CTCGCTGTTG CCATTCGTGA ACCTTATTGG CAACTGATCC CATTAATTAA CCGTGTTTTC
TCCAGTATGA GTGAGAAAGA AAAGCAGCAA ATCCGCAATA CTTGGCTAGC TGTAAATTAC
AGCGAAGGCA TCTCTTGGCA TACATTGATC ACAACACTGC TGCCTATTGC GATAGGTTTA
CTGCTTTTCA TTGGCGGCTT AACCATAGCC TATTTAAAAC TCAGACAAGA AATTAACAAG
CGCCGTATTG TCGAGAATGC CCTCGCTATC GCCAAGGAAA ATGCTGAACT AGCGACTAAA
AGAAAAGCAG AATTTCTTGC AGCTATGAGC CATGAGATCC GCACGCCCAT GAATGGGCTC
GTGGGCATGG CAGAGCAACT AAGCTTTACC CCCCTAGGTA TAGAACAAAA ACAAATGGTG
CAAATCATTA GTAATGGCGC GGAAGAAATC CTTCAGATCA TTAATAATAT TCTCGATTTT
TCTAAAATAG ACATGGGAAA AATGCGTCTA GAATCGACAC CAATACTATT GCGTGAAGTT
CTCGATAGTA CGCTTAATAT GGTCATGAAT GATTTACGCA CTAAAGACTT AAGCCTCTAC
TTACACGTTG ACCAAGGCGT AGCAGCACGG GTCACAGGAG ACAGTCTTCG CATAAAGCAG
ATCCTATTCA ATTGGGTAAG TAATGCTATT AAATTCACTG AACGCGGGTT TATTGAAGTC
TCGGTCAAGC TTGAAGCCGA AGAAGAGGGC CAACAATTAC TGCTGATTGG CGTACAAGAT
ACAGGTATCG GCATGAACGC TGATACTCAA GCGCGAATAT TTAATATTTT CGAGCAAGCA
GACGTCTCGA CGACACGTAG CTATGGTGGT GCAGGCTTGG GTCTTGCTAT CAGCCATACA
CTCGCTGAAA TGATGGGCGG TGACATTATC CTGAATAGCG CTCCTCATTT AGGTACATTT
ATTGGTTTAC GCATTCGTTT ACCTGTAGTT GCTCAAGATG AATTTGATGA ACAATTACAA
GGGTTACAGG CATATATTGC TATCAGCGAT ATAAAATTAC GTCACACTTT ATCTTGGCAT
TTAGCGTCAT TAGGCATTGT ATTAACTCAG AATAAAGCCA ATGCAGACCT GTTGTTTACT
GATAATGCTT CGGATGATCG GCAACATATA CTCTGCACTC ACTTTAATGA AGCACTTGGT
TATAGGTATC AAAACGATCA ATGTTTATTA AATGTAAACC CTCTAACATC GCAAGCGGTA
AAGGATGTTT GTTATATCAA TATGGGTTGG ATTGATACCA TAGTCTCGAC ACCGCAGAGG
GACATTACGC TTAAGGTAAA TTGGCCTGAA TGTAAAATTT TATTAATTGA AGATCATCAG
CTTAATCAGA TATTGGTACA ACGACAGCTA AAGCAATTGA GATTAGACTG TGATATTGCC
GAACATGGTG TCCAAGCGCT CGACCTCATG CAACAGACGC ATTACGACTT AATATTATGT
GATTGCCGCA TGCCAGTAAT GGATGGCTAC ACTTTTACCC AACAAGTGAG AGCACAGGAA
ATAGATGGAC AACACGTCCC CATTATTGCT CTAACTGCCA ACGTATTAAA TGAACAAAAA
CAACGATGTG CTGCAGTAGA GATGGATGAC CTACTGGCAA AACCGCTGCA TCTAAATGAA
CTGCATGAAA TGCTATTGAA ATGGCTCCCA CACTCAAAAC CTGCACTTAT CGATATAAAA
ATATTAGAGA ATGCATTTGG TCGCAGGGAG GCATTAAGTA AAATGCTATT AATGTTTAAA
GATGAACTCG AAAGCTCACT TAAGGATATT CAACTGACAG CTCCTCAACT TGCGGACAAT
ATCCATCGAA CTGCAGGAAC AATTAGTATG CTAGGTCTCA CATCAATTGC AGAGCAGGCT
TGGCTACTAG AAGAAAAAAT CAGACAAGAA GACAGCAACA ACGGAGAAGT CGAATTAACT
GAGTTTCGGG CGATAATAAT CCAATTGATA AGCGAGCTAA ACGCCATAAT CCACACAAGT
AACTGA
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| Protein sequence | MSAIQKIRYQ LLCILSYLPL LCMTFITHAE QPNTTTISVG VLANGWGPFQ QVNDQITTGF
SVELIQLLAK NLHYQIDWKI YPDWMSLYSA GCNGEVDVLL DAFRTTERTQ CLMFSRSYYT
SPTVVVIRYD SRFFRDVSEF GQARIAVEKG FSTEKLVKLH YPTVTEVTFS NTEQALSSVI
DKTTDAYIGN LHVANQYISA HPELLIVAQA PLMMENLHLG ITKNNSLLVT QLDNALMALS
VEERNALEVT WLGMGDLHFL GHSNFLLRPN EREWLAGLPS LRVGFVDDWM PFSSVNNNGI
LVGLIADYLE QFREKLGLDY AAQKTRTWNE IQSALINHEI DLAIIPTRLK AQYPDWHMSE
VFTSFPIVIA TARNSPRIAG LSELNFQRVV ITDNLLLPSI KKAYPNIDVV VSANPDEGLT
LVAKGNAAAY MGNLAVVAML IDNKFIDELR VAAPTPYKDE LAVAIREPYW QLIPLINRVF
SSMSEKEKQQ IRNTWLAVNY SEGISWHTLI TTLLPIAIGL LLFIGGLTIA YLKLRQEINK
RRIVENALAI AKENAELATK RKAEFLAAMS HEIRTPMNGL VGMAEQLSFT PLGIEQKQMV
QIISNGAEEI LQIINNILDF SKIDMGKMRL ESTPILLREV LDSTLNMVMN DLRTKDLSLY
LHVDQGVAAR VTGDSLRIKQ ILFNWVSNAI KFTERGFIEV SVKLEAEEEG QQLLLIGVQD
TGIGMNADTQ ARIFNIFEQA DVSTTRSYGG AGLGLAISHT LAEMMGGDII LNSAPHLGTF
IGLRIRLPVV AQDEFDEQLQ GLQAYIAISD IKLRHTLSWH LASLGIVLTQ NKANADLLFT
DNASDDRQHI LCTHFNEALG YRYQNDQCLL NVNPLTSQAV KDVCYINMGW IDTIVSTPQR
DITLKVNWPE CKILLIEDHQ LNQILVQRQL KQLRLDCDIA EHGVQALDLM QQTHYDLILC
DCRMPVMDGY TFTQQVRAQE IDGQHVPIIA LTANVLNEQK QRCAAVEMDD LLAKPLHLNE
LHEMLLKWLP HSKPALIDIK ILENAFGRRE ALSKMLLMFK DELESSLKDI QLTAPQLADN
IHRTAGTISM LGLTSIAEQA WLLEEKIRQE DSNNGEVELT EFRAIIIQLI SELNAIIHTS
N
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