Gene SO_4428 details

Gene Information

• Locus tag: SO_4428
• ID: 1172025
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4619137
• End bp: 4619814
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637346146
• Product: DNA-binding response regulator
• Protein accession: NP_719949
• Protein GI: 24375906
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAC TTTTAGTTGA AGATGATGCG ACAACGATTG ATTACATCGT TAAAGGATTT 
CTTGAGCAGG GACATAATAT TGAAACCGCC AGTGATGGTC ACCAAGGACT ACTGCAAGCC 
ACGAGTGGCC AGTATGATCT GTTGATCCTC GACCGCATGT TGCCTCAACT CGATGGTTTA 
AAACTCTTGG CCGCCCTCAG GGCTACTGGC AATCAAACCC CAGTATTGAT CCTGTCGGCG 
CTTGCCCATG TGGATGAACG GGTAAAAGGT CTGCGCGCAG GCGGCGATGA TTATATGACA 
AAGCCCTTTG CTTTTTCGGA GCTGTTAGTG CGTGCCGAAA AGCTGATGCA ACGGGGCCAA 
TCCACGCCCA TTACCACAGA TTTAGTGGTT GGCGGATTAA AAATGGAGCT GCTAACCCGC 
AACGTAACCT TAGATGGCCA CGATTTAATG TTACAGCCCA AAGAATTCCA ACTGCTTAAG 
TACCTGATGG AACATGCTAA TCAGGTTATT AGTCGCACGT TATTATTCGA AGCCGTGTGG 
GATTATCACT TCGATCCTCG CACCAATGTG ATTGATGTGC ATATTGCAAA ATTACGCCGT 
AAATTTGAAG AGTTAGGCCA CGGTGAGTTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC 
TTACGCCAAA GGCATTAA 

 

Protein sequence

MKILLVEDDA TTIDYIVKGF LEQGHNIETA SDGHQGLLQA TSGQYDLLIL DRMLPQLDGL 
KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ 
STPITTDLVV GGLKMELLTR NVTLDGHDLM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW 
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH