Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4427 |
Symbol | |
ID | 1172024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4617831 |
End bp | 4619087 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637346145 |
Product | sensor histidine kinase |
Protein accession | NP_719948 |
Protein GI | 24375905 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTGTGA TCATAGGCGC TTTGCTGTTT GCTCTCTATC GGCAATTGAT TATCGAGCAG CAGTATCAAG TCACTCAATA TCTTGAGTCA GAAACTCAGC GTTATCAGCA GCTTGCGCTT ACAGTCGATC GCCGCAGTTT TGCGGCACAA ATTCGTGCCG CCGATCCGCA AACCGCGCTT ATCGCTTGGC GCAATAGTTA CGATATGGTC GGTGCTTTAA GCTTTATGCC CGAAGGCATG CCCATGCTGC CACAAACGCG GGATTTTCCG ATATTAACCG GTGGGCCAGA TAAGCTGCAT ATTCTTACCG GTGGTCTGGT AATGACCCGC TATGGCCCCG TCTTGATTGC CACTCGTACC GATAACTTAG CTACTCTTAT CGATAAATTT ATCAGCGCGG CAGCCACTGC CGTGATGTTG ACTATCGTGC TGACCTTGGC GTTGGGCTAT TTGTTTTCTA AGGCAATTTT ACGCCGTTTA GTGCAATACA ACCGTTTAAG TGAGCAAATT GAGCGCGGAC ATTATGACAC GCGTTTGCCA CTCAGTTGGC GTCAGGACGA GTTCGATATG TTAGCGCTGC AATTTAATAA CGTGCTGGAT ATTCTCGAAA ATAACCTGAT GGCGGTACGT GGTGTGACAG ATAATATCGC CCACGATTTA CGCACACCCT TATCCCATAT CCGGATTGGT ATTGAGGAGT TGGCGACCAA GTCCCCCGAT GAAATTAGCG AAGGTTGTGC GATTTTGACC GAAGAACTCG ATCACTGTCT TGCGACTTTT GATGCCATGC TCTCCCTCAC ACGGATTGAG GAGGGTCAGC AAACCTTAGA TTTACAAGAG CTGAGTTTGG CCCAGCTCTG CACGGATTTG CTGGAAATGG CCGATGCGGT AGCTGAGTCG AATGAGCAAA CCTTGAGTCT GTCGCTACTT GCTGATCATA AAGTTCATGG CGATAAATAT TTGTTATTCC AAGCCTTATA TAATTTGGTT GACAATGCTA TGAAGTACTC AGGCCAAGGC GCTCGTATCG ATATTATTCA GTCCGGCGCT CAAATTAAGA TTTGCGATAA TGGCCCAGGG ATCCCCGATG ACAGCAAAGA AAGAGTGTTT GAGCGTTTAG TTCGCCTCGA CCCAAGCCGC CATTTGCAAG GCACAGGTTT AGGATTATCT ATGGTCAAAG CCATTCTATC GCGGCACAAT GCGCAGATTA CTCTTTCGGA TAACCATCCT GGCCTTGTGG TCACTATCCA GTTTTAG
|
Protein sequence | MTVIIGALLF ALYRQLIIEQ QYQVTQYLES ETQRYQQLAL TVDRRSFAAQ IRAADPQTAL IAWRNSYDMV GALSFMPEGM PMLPQTRDFP ILTGGPDKLH ILTGGLVMTR YGPVLIATRT DNLATLIDKF ISAAATAVML TIVLTLALGY LFSKAILRRL VQYNRLSEQI ERGHYDTRLP LSWRQDEFDM LALQFNNVLD ILENNLMAVR GVTDNIAHDL RTPLSHIRIG IEELATKSPD EISEGCAILT EELDHCLATF DAMLSLTRIE EGQQTLDLQE LSLAQLCTDL LEMADAVAES NEQTLSLSLL ADHKVHGDKY LLFQALYNLV DNAMKYSGQG ARIDIIQSGA QIKICDNGPG IPDDSKERVF ERLVRLDPSR HLQGTGLGLS MVKAILSRHN AQITLSDNHP GLVVTIQF
|
| |