| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4405 |
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| Symbol | katG-2 |
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| ID | 1172005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4597190 |
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| End bp | 4599376 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346128 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | NP_719928 |
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| Protein GI | 24375885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA CTCAACGCTC CCAAGGTAAA TGCCCCGTGA TGCATGGGGC CAATTCTGCC
GTTGCCAGTA ACAATATGGA CTGGTGGCCT AAGGCTCTTA ACCTCGATAT CTTGCACCAA
CACGATCAGA AAACGGATCC GATGGACCCT AACTTTAGTT ATCGTGATGC ATTCAACAGT
TTAGATCTCG CAGCAGTGAA GCAGGACTTA CATTCCCTTA TGACCGATAG CCAAGATTGG
TGGCCAGCCG ATTGGGGGCA TTATGGCGGT TTGATGATCC GTATGGCATG GCACTCCGCA
GGAACCTATC GGATTGCAGA TGGCCGTGGC GGTGCGGGGA CGGGGAATCA ACGCTTTGCG
CCGCTCAATA GCTGGCCAGA TAACGCCAAC CTTGATAAAG CCCGTCGGTT ACTTTGGCCG
ATTAAGAAAA AATACGGCAA TAAACTCTCA TGGGCGGATT TGATTATTCT GGCTGGCAAC
GTGGCCTATG AATCTATGGG ATTAAAAACC TTTGGCTTTG CCGGTGGTCG TGCCGATATC
TGGCATCCTG AAAAAGACAT TTATTGGGGC TCAGAAAAAC AATGGCTCGC GCCGAGTGAT
AATCCGAACA GTCGTTACTC TGGTGCTCGC GACCTTGAAA ATCCCTTGGC CGCCGTAATG
ATGGGGCTGA TTTATGTGAA TCCCGAAGGA GTTGATGGTA AGCCCGATCC ACTGCGCACC
GCCCAAGATG TGCGTATCAC CTTTGCGCGG ATGGCGATGG ATGATGAAGA AACCGTCGCC
TTAACTGCGG GTGGCCACAC TGTAGGTAAA TGCCATGGTA ATGGTAAAGC TCAAGACCTT
GGCCCCGAAC CAGAGGGTGA GGATGTTGAA GCGCAAGGTT TAGGTTGGTT AAACAAAAAA
GGCCGTGGCG TTGGCTGTGA TGCTGTGACC AGTGGCCTTG AAGGGGCTTG GACGACTCAC
CCAACCCAGT GGGATAACGG CTACTTTTAC TTGCTGTTAA ATTACGACTG GGAACTAAAA
AAGAGTCCCG CCGGAGCGTG GCAATGGGAA CCCATCAATA TTAAAGAAGA AGATAAAGTT
ATCTCTGTGG GTGACCCTGC GAAGAAGTTT AACCCCATCA TGACGGATGC GGATATGGCG
ATGAAGATAG ACCCCGAATA TCGCAAAATA TCCGAGAGGT TTTATCAAGA TCCCGCCTAT
TTCTCCGAGG TGTTTGCCCG TGCTTGGTTT AAGTTAACTC ACCGTGATCT TGGGCCTAAA
AGCCGTTATT TAGGGCCAGA AGTCCCGAGT GAAGAGTTGA TTTGGCAAGA CCCAATCCCG
AGCGTCGATT ACCGTTTAGT TGCCAGTGAG ATTGTCGAAC TTAAGGCGAA ATTATTAGCC
TCGGGACTCA GCGTATCTGA GTTAGTGGCG ACCGCTTGGG ATAGCGCGCG CACCTTTCGA
GGCTCGGATT TCCGTGGTGG GGCCAATGGC GCACGAATTC GTTTAGCGCC ACAAAAAGAT
TGGTCAGGAA ATGAGCCTGA GCGTTTGCAA AAAGTATTGA AAGTATTGAG CGCGTTGCAG
GCAAGCTTGA GCAAAAAAGT CAGTATTGCT GATTTGATTG TCCTCGGCGG CGCTGCGGCG
ATTGAAAAGG CCGCCCACGC TGCGGGAGTC AATATCACAG TACCTTTCAT GCCTGGCCGT
GGTGATGCCA CGAAGGAAAT GACCGATGTG GAATCCTTTG TCGTGCTTGA ACCTTTGCAC
GATGCGTATC GCAACTGGCT GAAACAGGAT TATGTGGTTC AGCCTGAGGA GATGATGCTC
GATCGCTCGC AACTGATGGG GTTAACCGCC CATGAGATGA CGGTACTGAT AGGCGGCATG
CGGGTATTAG GCACTAACCA TGGCGGTACG CGTCACGGTG TGTTTACCGA TAAAGTGGGT
GTGTTAAGTA ATGATTTCTT TGTGAATCTC ACCGACATGG CCTACAGCTG GAAACCCGTT
GGCACTAACC TGTATGAAGT TGTTGAGCGC AAAACTGGTA CGGTGAAGTG GACGGCAACC
CGCGTCGATT TAGTGTTTGG GTCTAACTCT GTGCTGCGCG TTTACGCCGA GGTGTATGCA
CAGGATGATG CTAAGGAAAA GTTTGTGCAT GATTTTGTGG CTGCTTGGAC CAAGGTGATG
AATGCCGACA GGTTCGATTT GGCTTAG
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| Protein sequence | MDKTQRSQGK CPVMHGANSA VASNNMDWWP KALNLDILHQ HDQKTDPMDP NFSYRDAFNS
LDLAAVKQDL HSLMTDSQDW WPADWGHYGG LMIRMAWHSA GTYRIADGRG GAGTGNQRFA
PLNSWPDNAN LDKARRLLWP IKKKYGNKLS WADLIILAGN VAYESMGLKT FGFAGGRADI
WHPEKDIYWG SEKQWLAPSD NPNSRYSGAR DLENPLAAVM MGLIYVNPEG VDGKPDPLRT
AQDVRITFAR MAMDDEETVA LTAGGHTVGK CHGNGKAQDL GPEPEGEDVE AQGLGWLNKK
GRGVGCDAVT SGLEGAWTTH PTQWDNGYFY LLLNYDWELK KSPAGAWQWE PINIKEEDKV
ISVGDPAKKF NPIMTDADMA MKIDPEYRKI SERFYQDPAY FSEVFARAWF KLTHRDLGPK
SRYLGPEVPS EELIWQDPIP SVDYRLVASE IVELKAKLLA SGLSVSELVA TAWDSARTFR
GSDFRGGANG ARIRLAPQKD WSGNEPERLQ KVLKVLSALQ ASLSKKVSIA DLIVLGGAAA
IEKAAHAAGV NITVPFMPGR GDATKEMTDV ESFVVLEPLH DAYRNWLKQD YVVQPEEMML
DRSQLMGLTA HEMTVLIGGM RVLGTNHGGT RHGVFTDKVG VLSNDFFVNL TDMAYSWKPV
GTNLYEVVER KTGTVKWTAT RVDLVFGSNS VLRVYAEVYA QDDAKEKFVH DFVAAWTKVM
NADRFDLA
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