Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4401 |
Symbol | rbn |
ID | 1172001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4593675 |
End bp | 4594562 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346124 |
Product | ribonuclease BN |
Protein accession | NP_719924 |
Protein GI | 24375881 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTAAGA AGATAGATCT GGCACAAATT CGAGTCTTAC TCCTCGGGAT CTGGCACTTC CTGCTGCATT TACGCCAGCG CCTAGTTGAA GATCAAATCA ATATTCGTGC GGGCCACTTG GCCTATGTCA CCCTGTTATC GCTCGTGCCT ATGGTGGCGG TGACTATGTC GATGCTATCG GCGTTTCCTG TGTTTAAGGG GATCCGTGGC CAAATTGAAG CCTTTGTTTA CGAGAATTTT CTACCCGCAG CGGGCGATAC GGTACAAGTT TATATTAATG AATTTGTGGG CAATGCCTCG AAGGGGACTG CTGTGGGGAT CGCGGCCTTA GTCGTGGTGG CAATTATGCT GATTTCGGCC ATTGATAAAT CGTTGAATAA TATCTGGCGC ACCAAGGAAA AACGCTCGGT CGTGGTGGCC TTTTCCATGT ATTGGATGGT GATTACCTTA GGCCCTGTGC TGGTGGGCGC GAGCTTAGTG GCGACCTCCT ATGTGGTGTC GCTAAAACTG TTTGAGGGTG ATGCTTTATC TGGCATGATG CCGCTGTTTA TTGAGCGTTT GCCGTTGTTA TTTTCGGTGG CTGCATTTTT ACTCTTGTAT ATGGTGGTGC CTAATCAAAA GGTGAAGTTT TGGCACGCGC TGTTGGGCGC TGTGGTGGCG GCGCTGCTAT TTGAATTGGG GAAAAAAGGC TTTGCCTTTT ATGTGACAAA ATTCCCAAGT TATGAGGCAA TTTACGGTGC GCTGGCGACT ATTCCGATCC TATTTGTTTG GGTGTATTTA TCCTGGATGA TCGTGCTGCT GGGCGCCGAA ATTACCGCCG CCATGCCGGA ATATTTGGAT TATGAGTCCA GCAGCAATGC TGGCGAAACT CAGCCCTTGG CAGAGTAA
|
Protein sequence | MTKKIDLAQI RVLLLGIWHF LLHLRQRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS AFPVFKGIRG QIEAFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA IDKSLNNIWR TKEKRSVVVA FSMYWMVITL GPVLVGASLV ATSYVVSLKL FEGDALSGMM PLFIERLPLL FSVAAFLLLY MVVPNQKVKF WHALLGAVVA ALLFELGKKG FAFYVTKFPS YEAIYGALAT IPILFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSNAGET QPLAE
|
| |