Gene SO_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4401 
Symbolrbn 
ID1172001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4593675 
End bp4594562 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content49% 
IMG OID637346124 
Productribonuclease BN 
Protein accessionNP_719924 
Protein GI24375881 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTAAGA AGATAGATCT GGCACAAATT CGAGTCTTAC TCCTCGGGAT CTGGCACTTC 
CTGCTGCATT TACGCCAGCG CCTAGTTGAA GATCAAATCA ATATTCGTGC GGGCCACTTG
GCCTATGTCA CCCTGTTATC GCTCGTGCCT ATGGTGGCGG TGACTATGTC GATGCTATCG
GCGTTTCCTG TGTTTAAGGG GATCCGTGGC CAAATTGAAG CCTTTGTTTA CGAGAATTTT
CTACCCGCAG CGGGCGATAC GGTACAAGTT TATATTAATG AATTTGTGGG CAATGCCTCG
AAGGGGACTG CTGTGGGGAT CGCGGCCTTA GTCGTGGTGG CAATTATGCT GATTTCGGCC
ATTGATAAAT CGTTGAATAA TATCTGGCGC ACCAAGGAAA AACGCTCGGT CGTGGTGGCC
TTTTCCATGT ATTGGATGGT GATTACCTTA GGCCCTGTGC TGGTGGGCGC GAGCTTAGTG
GCGACCTCCT ATGTGGTGTC GCTAAAACTG TTTGAGGGTG ATGCTTTATC TGGCATGATG
CCGCTGTTTA TTGAGCGTTT GCCGTTGTTA TTTTCGGTGG CTGCATTTTT ACTCTTGTAT
ATGGTGGTGC CTAATCAAAA GGTGAAGTTT TGGCACGCGC TGTTGGGCGC TGTGGTGGCG
GCGCTGCTAT TTGAATTGGG GAAAAAAGGC TTTGCCTTTT ATGTGACAAA ATTCCCAAGT
TATGAGGCAA TTTACGGTGC GCTGGCGACT ATTCCGATCC TATTTGTTTG GGTGTATTTA
TCCTGGATGA TCGTGCTGCT GGGCGCCGAA ATTACCGCCG CCATGCCGGA ATATTTGGAT
TATGAGTCCA GCAGCAATGC TGGCGAAACT CAGCCCTTGG CAGAGTAA
 
Protein sequence
MTKKIDLAQI RVLLLGIWHF LLHLRQRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS 
AFPVFKGIRG QIEAFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA
IDKSLNNIWR TKEKRSVVVA FSMYWMVITL GPVLVGASLV ATSYVVSLKL FEGDALSGMM
PLFIERLPLL FSVAAFLLLY MVVPNQKVKF WHALLGAVVA ALLFELGKKG FAFYVTKFPS
YEAIYGALAT IPILFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSNAGET QPLAE