Gene SO_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4387 
Symbol 
ID1171989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4583032 
End bp4584534 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content40% 
IMG OID637346113 
Productsensor histidine kinase 
Protein accessionNP_719911 
Protein GI24375868 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGA ATTATGAACA CTACCTTTTT CTATTTGTTA TCATCACTGG CCTGATAATG 
GGAGTTATTA GTTATTTTGG CTTTCGAGCG CTGACACAAG AAAGCACCCT GAATGAATAC
CAAACTCAAC AATTGGCTAA AAGCCACGTA GCTCAAACTC AATCATTTAT TCTGCAACAG
CTGAATCAAA AACAGGTTAG ATTAGATGCC ATGCTAGCCT ATCTGTCTCT AGATAAAAAT
GCGCTACATA CCTTGATATC CCAAGACAGC GATATCGAGA ACATCTTTGT TCTGCAAAAA
AATAAGCTCG CTTTTCCTGA TATATCTCAA CCTTTAAGTT TGAAAGATCA AACGCTGGCT
GAACTGATTA TGCCAATAAG CCATGACCCT ACATTGTTAA TGGCTAAACA ACCCACATCT
GAAGATAAAA GCCCTAACTC TGGCTGGTTA GTCTTACAAG ACAATAACTA TCCAGCACTT
ATTTACTGGC GTAAAACCGA TGAAGATACG GTAGGTATAA AACTCTCTTA CGTTAAATTT
TTAGCTGATG TTATCTCTGC TCTCGATACA AATTTTACAC CTGATGGTAT AAAAATTTCC
GATAACGGCC AGGTACTTTA CCAACTGTCC CCAGAGCCTA TCGGTAATAA TCAAACGCCT
TCTTATAGCC AGAATTTACC TTTTCCGCTA CACGGTTGGC AGATTGACTA TTATACCGCA
CCTGTGAAAG GGCAATCTCT TTACTATCTA GGCACCATAT TAATTGTCAC CATTATTTTG
GCCGTTGGCT TTATGGCATT TATGCTATAT CGCGAGTTTA ATCGCGCAAC CAGATTAGCA
AGCCAACAGG TTAGTTTTGT CGGACAGGTT TCTCACGAAC TTAAAACGCC ACTGACGAAT
ATCACGCTTT ATGCTGAAAT GCTTAACGAA ATGGAAGCAG AGGAAAACGA CCAGAGAGCC
CATTATCTTG GAGTCATTAT CAGTGAAAGC CAACGCCTAT CTCGCCTGAT TCAAAACGTG
TTGACCTTCA CCAAACTGCC ACAAATTTGC ATTCGCCAAG TCGATATTAA TCAATTAATG
AATCAAATTT ATACTGCGTT CAAACCCGTA TTTGAAGCCA AAGAAATCCA TCTCAACCTC
AATATTAATG GGCAATTATC AACGAAAACA GACGTTGATC TGGTAACCCA GATTATCAGT
AACCTACTCA GTAATGCCGA AAAATATGCT GCAACAGGTA AGCAGGTTGA CCTTAATGTC
GAACAAGATA ACGACAATAT TTTTATACAT ATCCGAGACT ACGGTAACGG CATAACGGCT
AAAGAGTTAA AACAAATATT CCAGCCGTTT TATCGGGTTA GATCATCGAT TACCGAAGGA
GTGAGCGGAA CAGGTATCGG ACTCACCATT GCCCGCCAGT TAGCTGAAAC GCTGAGCGGT
GAGATTAACG CAATCAACAA TGAGCCCGGA ATGACGTTTA CGCTAAGACT TCCAAAACGC
TAA
 
Protein sequence
MTQNYEHYLF LFVIITGLIM GVISYFGFRA LTQESTLNEY QTQQLAKSHV AQTQSFILQQ 
LNQKQVRLDA MLAYLSLDKN ALHTLISQDS DIENIFVLQK NKLAFPDISQ PLSLKDQTLA
ELIMPISHDP TLLMAKQPTS EDKSPNSGWL VLQDNNYPAL IYWRKTDEDT VGIKLSYVKF
LADVISALDT NFTPDGIKIS DNGQVLYQLS PEPIGNNQTP SYSQNLPFPL HGWQIDYYTA
PVKGQSLYYL GTILIVTIIL AVGFMAFMLY REFNRATRLA SQQVSFVGQV SHELKTPLTN
ITLYAEMLNE MEAEENDQRA HYLGVIISES QRLSRLIQNV LTFTKLPQIC IRQVDINQLM
NQIYTAFKPV FEAKEIHLNL NINGQLSTKT DVDLVTQIIS NLLSNAEKYA ATGKQVDLNV
EQDNDNIFIH IRDYGNGITA KELKQIFQPF YRVRSSITEG VSGTGIGLTI ARQLAETLSG
EINAINNEPG MTFTLRLPKR