Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4387 |
Symbol | |
ID | 1171989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4583032 |
End bp | 4584534 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637346113 |
Product | sensor histidine kinase |
Protein accession | NP_719911 |
Protein GI | 24375868 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGA ATTATGAACA CTACCTTTTT CTATTTGTTA TCATCACTGG CCTGATAATG GGAGTTATTA GTTATTTTGG CTTTCGAGCG CTGACACAAG AAAGCACCCT GAATGAATAC CAAACTCAAC AATTGGCTAA AAGCCACGTA GCTCAAACTC AATCATTTAT TCTGCAACAG CTGAATCAAA AACAGGTTAG ATTAGATGCC ATGCTAGCCT ATCTGTCTCT AGATAAAAAT GCGCTACATA CCTTGATATC CCAAGACAGC GATATCGAGA ACATCTTTGT TCTGCAAAAA AATAAGCTCG CTTTTCCTGA TATATCTCAA CCTTTAAGTT TGAAAGATCA AACGCTGGCT GAACTGATTA TGCCAATAAG CCATGACCCT ACATTGTTAA TGGCTAAACA ACCCACATCT GAAGATAAAA GCCCTAACTC TGGCTGGTTA GTCTTACAAG ACAATAACTA TCCAGCACTT ATTTACTGGC GTAAAACCGA TGAAGATACG GTAGGTATAA AACTCTCTTA CGTTAAATTT TTAGCTGATG TTATCTCTGC TCTCGATACA AATTTTACAC CTGATGGTAT AAAAATTTCC GATAACGGCC AGGTACTTTA CCAACTGTCC CCAGAGCCTA TCGGTAATAA TCAAACGCCT TCTTATAGCC AGAATTTACC TTTTCCGCTA CACGGTTGGC AGATTGACTA TTATACCGCA CCTGTGAAAG GGCAATCTCT TTACTATCTA GGCACCATAT TAATTGTCAC CATTATTTTG GCCGTTGGCT TTATGGCATT TATGCTATAT CGCGAGTTTA ATCGCGCAAC CAGATTAGCA AGCCAACAGG TTAGTTTTGT CGGACAGGTT TCTCACGAAC TTAAAACGCC ACTGACGAAT ATCACGCTTT ATGCTGAAAT GCTTAACGAA ATGGAAGCAG AGGAAAACGA CCAGAGAGCC CATTATCTTG GAGTCATTAT CAGTGAAAGC CAACGCCTAT CTCGCCTGAT TCAAAACGTG TTGACCTTCA CCAAACTGCC ACAAATTTGC ATTCGCCAAG TCGATATTAA TCAATTAATG AATCAAATTT ATACTGCGTT CAAACCCGTA TTTGAAGCCA AAGAAATCCA TCTCAACCTC AATATTAATG GGCAATTATC AACGAAAACA GACGTTGATC TGGTAACCCA GATTATCAGT AACCTACTCA GTAATGCCGA AAAATATGCT GCAACAGGTA AGCAGGTTGA CCTTAATGTC GAACAAGATA ACGACAATAT TTTTATACAT ATCCGAGACT ACGGTAACGG CATAACGGCT AAAGAGTTAA AACAAATATT CCAGCCGTTT TATCGGGTTA GATCATCGAT TACCGAAGGA GTGAGCGGAA CAGGTATCGG ACTCACCATT GCCCGCCAGT TAGCTGAAAC GCTGAGCGGT GAGATTAACG CAATCAACAA TGAGCCCGGA ATGACGTTTA CGCTAAGACT TCCAAAACGC TAA
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Protein sequence | MTQNYEHYLF LFVIITGLIM GVISYFGFRA LTQESTLNEY QTQQLAKSHV AQTQSFILQQ LNQKQVRLDA MLAYLSLDKN ALHTLISQDS DIENIFVLQK NKLAFPDISQ PLSLKDQTLA ELIMPISHDP TLLMAKQPTS EDKSPNSGWL VLQDNNYPAL IYWRKTDEDT VGIKLSYVKF LADVISALDT NFTPDGIKIS DNGQVLYQLS PEPIGNNQTP SYSQNLPFPL HGWQIDYYTA PVKGQSLYYL GTILIVTIIL AVGFMAFMLY REFNRATRLA SQQVSFVGQV SHELKTPLTN ITLYAEMLNE MEAEENDQRA HYLGVIISES QRLSRLIQNV LTFTKLPQIC IRQVDINQLM NQIYTAFKPV FEAKEIHLNL NINGQLSTKT DVDLVTQIIS NLLSNAEKYA ATGKQVDLNV EQDNDNIFIH IRDYGNGITA KELKQIFQPF YRVRSSITEG VSGTGIGLTI ARQLAETLSG EINAINNEPG MTFTLRLPKR
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