Gene SO_4357 details

Gene Information

• Locus tag: SO_4357
• Symbol: dmsB-2
• ID: 1171960
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4550380
• End bp: 4550997
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637346084
• Product: anaerobic dimethyl sulfoxide reductase, B subunit
• Protein accession: NP_719881
• Protein GI: 24375838
• COG category: [C] Energy production and conversion
• COG ID: [COG0437] Fe-S-cluster-containing hydrogenase components 1
• TIGRFAM ID: [TIGR02951] DMSO reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAC CAACCCAATA CGGTTTTTAT GTCGATACCA CTAAGTGCAG TGGTTGCAAA 
ACGTGTCAAG TGGCCTGTAA GGATCGCAGT GATATCGAGG TCGGTAAACA GTGGCGCAGA 
ACCTACGAAT ATTGTGGTGG AAATTGGACT GCTGATGGGC AGGGTGCTTA CCATCAAGAT 
GTATTTGCCT ATTATATTTC AATAAGTTGC AACCATTGTA GCAATCCGGT GTGTGTTAAA 
GCTTGCCCTA CGGGGGCTAT GTATAAAGAG CGCAGCACTG GCTTAGTGAA AGTGAATCAG 
GATCTGTGTA TTGGCTGCGA AAGCTGTGCT CGTGCTTGTC CTTATGATGC ACCACAGATC 
GATCCACAAC GTAAAGTGAT GACTAAGTGT GATGGTTGCA GCGACCGTGT TGCCAAGGGC 
CTCAAACCAA GTTGTGTGAT GTCCTGCCCG CAGCGCGCCT TAGATTTTGG TTTAATTGCC 
GAGTTAAAGC AACAGTATGG CAACGATAGC GATATATCAG GTTTGCCATC ATCTTCTATT 
ACTCACCCAA ATTTAGTGTT AAAGGTGCAT GCTAAATCAG GGCAGCGTGG GGAGATTATT 
AACATCACAG AAGTGTAA 

 

Protein sequence

MQEPTQYGFY VDTTKCSGCK TCQVACKDRS DIEVGKQWRR TYEYCGGNWT ADGQGAYHQD 
VFAYYISISC NHCSNPVCVK ACPTGAMYKE RSTGLVKVNQ DLCIGCESCA RACPYDAPQI 
DPQRKVMTKC DGCSDRVAKG LKPSCVMSCP QRALDFGLIA ELKQQYGNDS DISGLPSSSI 
THPNLVLKVH AKSGQRGEII NITEV