| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4349 |
|---|
| Symbol | ilvC |
|---|
| ID | 1171952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4541742 |
|---|
| End bp | 4543220 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637346076 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | NP_719873 |
|---|
| Protein GI | 24375830 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACT ATTTTAACTC TCTGAATTTA CGTCAACAAT TAGCACAACT TGGCCAGTGT
CGTTTTATGG ACCGTTCCGA GTTTAGTGAT GGCTGCAATT ACATCAAAGA TTGGAATATT
GTTATTTTAG GCTGTGGTGC TCAGGGCCTT AACCAAGGTC TGAACATGCG TGACTCTGGG
CTGAATATCG CTTACGCCCT GCGCCCAGAA GCCATTGCCC AAAAACGTGC CTCATGGCAA
AAAGCCACCG ATAACGGCTT TAAAGTCGGC ACCTTTGAAG AGCTGATCCC GAGCGCCGAT
TTAGTGCTGA ACCTAACACC CGATAAGCAG CATTCCAATG TAGTGAGCGC AGTGATGCCG
CTGATGAAGC AAGGCGCGAC CCTGTCTTAC TCCCATGGTT TCAACATCGT TGAAGAAGGC
ATGCAGATCC GCCCAGATAT CACGGTCATC ATGGTGGCGC CTAAGTGCCC AGGTACCGAA
GTGCGTGAAG AATACAAGCG TGGCTTTGGT GTGCCGACCT TGATTGCTGT GCACCCCGAA
AACGACCCTA ATGGCGATGG TTTAGACATC GCGAAAGCCT ATGCGAGCGC CACAGGCGGC
GACCGTGCTG GCGTGTTGCA ATCCTCTTTT ATCGCTGAAG TAAAATCGGA TCTGATGGGC
GAGCAAACGA TCCTCTGCGG TATGTTACAG ACTGGTGCCA TCCTAGGTTA TGAAAAAATG
GTGGCCGATG GTGTTGAGCC TGGCTACGCC GCTAAGTTAA TCCAACAAGG TTGGGAAACC
GTGACCGAGG CGCTTAAGCA CGGCGGTATC ACCAACATGA TGGATAGATT GTCTAATCCT
GCCAAGATTA AAGCGTTTGA AATTGCAGAA GATTTAAAAG ATATCCTGCA ACCATTATTT
GAAAAGCACA TGGATGACAT CATCAGCGGT GAGTTCTCTC GCACTATGAT GCAAGACTGG
GCCAATGACG ATGCAAACTT GCTACGTTGG CGCGCCGAAA CCGGTGAAAC TGGTTTCGAA
AATGCGCCAG TTTCGAGCGA GCATATCGAC GAGCAAACCT ATTTCGACAA AGGTATTTTC
CTGGTCGCGA TGATCAAAGC GGGTGTGGAG CTGGCGTTCG ATACTATGGT GTCTGCGGGG
ATTGTTGAAG AGTCGGCTTA CTACGAGTCA TTGCACGAAA CGCCGCTGAT TGCTAACACC
ATCGCCCGTA AGCGTCTGTA CGAGATGAAC GTGGTGATCT CCGATACCGC AGAATATGGT
TGTTATCTGT TCAACCATGC CGCTGTGCCA CTGCTGCGTG ACTATGTAAA TGCCATGTCG
CCAGAGTACT TAGGCGCAGG TCTGAAGGAC AGTTCTAATA GTGTTGATAA TCTGCAATTA
ATCGCGATTA ACGATGCAAT CCGCCACACT GCAGTGGAAT ATGTTGGCGC CGAACTCCGC
GGTTATATGA CTGATATGAA AAGTATTGTT GGAGCTTAA
|
|---|
| Protein sequence | MANYFNSLNL RQQLAQLGQC RFMDRSEFSD GCNYIKDWNI VILGCGAQGL NQGLNMRDSG
LNIAYALRPE AIAQKRASWQ KATDNGFKVG TFEELIPSAD LVLNLTPDKQ HSNVVSAVMP
LMKQGATLSY SHGFNIVEEG MQIRPDITVI MVAPKCPGTE VREEYKRGFG VPTLIAVHPE
NDPNGDGLDI AKAYASATGG DRAGVLQSSF IAEVKSDLMG EQTILCGMLQ TGAILGYEKM
VADGVEPGYA AKLIQQGWET VTEALKHGGI TNMMDRLSNP AKIKAFEIAE DLKDILQPLF
EKHMDDIISG EFSRTMMQDW ANDDANLLRW RAETGETGFE NAPVSSEHID EQTYFDKGIF
LVAMIKAGVE LAFDTMVSAG IVEESAYYES LHETPLIANT IARKRLYEMN VVISDTAEYG
CYLFNHAAVP LLRDYVNAMS PEYLGAGLKD SSNSVDNLQL IAINDAIRHT AVEYVGAELR
GYMTDMKSIV GA
|
|---|
| |