Gene SO_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4332 
Symbol 
ID1171938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4523931 
End bp4525097 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content48% 
IMG OID637346062 
Producthypothetical protein 
Protein accessionNP_719856 
Protein GI24375813 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTC CTTATTCACC CCGTGAGTGG TTACAACTGA ATATGCAACA GCAGGGCTTG 
TTACAGCCAC AGACTTCGGT GGGCCAGCTG ATTGCCTGTC TCGGCTATGT GCAAATCGAC
TCCATTAATG TGGTCGAGCG GGCGCATCAC CATGTGTTGC ACAGCCGGAT GCCGCAGTAT
CAACCGCAGA TGCTGGATAC GGCGCTAGCA CAGGGCGAGA TTTTTGAATA TTGGTCCCAT
GCGGCGGCAT ATTTACCCAT TGCCGACTAC CGTTTTAGTT TGCAACGTAA ACAACAACTG
CAAAATGGCG GCAAACATTG GTTTGAGCCA GACGATAACG CGATGCAGGA AGTGCGCGCC
CGCATTCGCG CCGAAGGTCC GCTCAAGGCC AGCGATTTTG AGCATACCGA AGGTAAAAAC
GGCGCATGGT GGGATTGGAA ACCCGCTAAA AAGGCGTTGG AACAACTGTT TATGCGCGGT
GAATTAATGG TGGTGCGACG GGAAAAGTTT CAAAAGTGCT ATGATTTGAC TGAACGTGTG
TTGCCTAGTC ATATCAATAC GCTAGCCCCG AGTGATAGCG AATTTGCCCG CCATTTGATT
AGTCGTTACC TCGATGCCCA TGCCTTTGGC TCAGCAGCGC AAATCGCCTA TCTGCGTAAA
GGGATTAAAG CCAATGTGAA TCAGCAATTA GCCGCAATGC AGTCTCAAGG TGAGTTGGCA
AGCTTTAAGG CTGAGGGACA ATGGTATTTT TATCGCCCTG AGTTGCAAAT AACCGCTGCC
ATGCCCAACC GAGTCTGGTT ACTCAATCCC TTTGATAATC TATTAATTCA GCGGCAACGA
TTAAAGCAAT GGTTTGATTT TGATTACCAA ATTGAAGTCT ATGTGCCCGC CGAAAAACGC
CAATATGGTT ATTATTCCCT CGCTATTTTG TGGCGGGATC GCTTCGTTGG CCGCGTGGAT
GTTAAAGCTG ATAGGCAAAG CGGTTTACTG CTATTGCAAC AACTGACCTT AGAAGAAGGA
TTCGATGGCA TGGATGAAGG CTTTTGTAGC GCATTTGAGG CGACAGTGAG TGAATATGCC
CGTTTTAATA TTTGTAGTCG TTGGAAATTA GTAAAGGCTA ACCATAAGGC GTTTAAGCAA
AAATATTCAC GGCAACAAAT GAGTTAA
 
Protein sequence
MSSPYSPREW LQLNMQQQGL LQPQTSVGQL IACLGYVQID SINVVERAHH HVLHSRMPQY 
QPQMLDTALA QGEIFEYWSH AAAYLPIADY RFSLQRKQQL QNGGKHWFEP DDNAMQEVRA
RIRAEGPLKA SDFEHTEGKN GAWWDWKPAK KALEQLFMRG ELMVVRREKF QKCYDLTERV
LPSHINTLAP SDSEFARHLI SRYLDAHAFG SAAQIAYLRK GIKANVNQQL AAMQSQGELA
SFKAEGQWYF YRPELQITAA MPNRVWLLNP FDNLLIQRQR LKQWFDFDYQ IEVYVPAEKR
QYGYYSLAIL WRDRFVGRVD VKADRQSGLL LLQQLTLEEG FDGMDEGFCS AFEATVSEYA
RFNICSRWKL VKANHKAFKQ KYSRQQMS