Gene SO_4321 details

Gene Information

• Locus tag: SO_4321
• ID: 1171926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4508558
• End bp: 4509163
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637346047
• Product: OmpA family protein
• Protein accession: NP_719846
• Protein GI: 24375803
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGT CTATCCTATT ACTTAGCGTG ACGCTTTTAG CGGGTTGCTC CATACGTGAT 
ACAGTCAATA TTGACGAGAT GACCACGACC CAGGCATCCG ATCTTTCTGA TAAGGATGGT 
GATGGTGTCA TTGAAGCCCG TGAACGTTGT AACGAAACGG CAAAGGGTGC AGGCACGGAT 
AACTACGGCT GTGGTCAAAT AAAGTCAATT AATGAACGTA AGGAAATCAA CGTATTATTT 
CCTAACAACT CAGCTTATAT TGCACCTGAG TATTATCCTC AAATCGAAGA AGTGGCGATA 
TTCTTACGTC AATATCCCAC AACTAAAGTG ACCATTGAAG GACACACAAG TCGTACAGGC 
ACGGACGAAA CAAACAAGGA ATTATCGCAG GAGCGTGCTA ATGCTGTTAC CGCCGTTCTC 
GCCGAACGTT TCGGTATCGA CAGAAGCCGA CTGACAGCCA TAGGCTATGG TTCAAGTCGT 
CCAATTGTTT TAGAGCAGAC TCCTGAAGCT GAAATACGTA ACCGTAGAGT CGTTGCAGAG 
GTGACGGGTG ACGATACAGC AACAGATATG AAATGGACGA TTTATTCCGT CGATGACACC 
AATTAA 

 

Protein sequence

MKTSILLLSV TLLAGCSIRD TVNIDEMTTT QASDLSDKDG DGVIEARERC NETAKGAGTD 
NYGCGQIKSI NERKEINVLF PNNSAYIAPE YYPQIEEVAI FLRQYPTTKV TIEGHTSRTG 
TDETNKELSQ ERANAVTAVL AERFGIDRSR LTAIGYGSSR PIVLEQTPEA EIRNRRVVAE 
VTGDDTATDM KWTIYSVDDT N