Gene SO_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4316 
Symbol 
ID1171921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4493603 
End bp4494769 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content46% 
IMG OID637346042 
ProducthemY protein, putative 
Protein accessionNP_719841 
Protein GI24375798 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAG TATTAATATT TTTTGGAATT ATACTTTTAG GCCTATGTAT TAGCCCTTGG 
ATTGTTGGTA ATACGGGTTA TGTATATATC GCAGCGGGAG ATTATCAGCT CGAAACCAGC 
TTAGCCTTTG GGATTATCAT GTTAATCGTG TTCTATGCGC TATTCCAAGT ACTGGAATGG 
CTGGTGATCA CAGTGATTAA TTTGCTGTTA CGCAGCCGCT TTATTCCACA TCAATGGCGT 
CGCCGCTCTG CAAAAAAACA CACCTTAATG GGTGCTCTCG CCATTGCAGA GGAAGATTGG 
CCAGCCGCTG AGCGCGCCAT GATTAAAGGC GCAGACAATG GTGAACTGCC CGCTCTGAAT 
TTGTTAGCGG CAGCGCGTGC GGCTCAACAT CAAAATAAAA CTGCCGAGCG AGATCAATAT 
CTTGCCCGCG CCGAAACCCA ACCTCTGGCG GCAAATGCCG TTGCAACTAC TCGCACCCGC 
TACTTACTAA AACAAGGCGA GTTCACCTTA GCCAGAGCCG AGCTCGATAA GTTAGCACCT 
ACCAGCAAGA GTAAAGCACC AGTCCTCAAG CTCGCCCTTG AGTTGTACCG CGCACAGCAG 
GATTGGGAAG CACTTAAATT ACTGCTACCA ATACTGAAAA AACGCCAGAT CCTTGATGAT 
ATTCAGCTTA ACTCCCTCAG TGTTGAAACC CATAGCGCTT TGTTACAAAC AGCGAGTCTC 
AAAGGGGAAG ATGCCTTAGA ACAATGCTGG CAATGGTTAT CACGTGATGA ACGAAACCAA 
TCTGAATTTT TAGCGATTTA CACCATGGGC TTATGCCGTT TCAATCGCAA AGAGCAAGCC 
ATTAAATTGC TCTCGAAAAA GCTGCGCAGT TCACCAGAAT CGGCATTGCT AGAAGTAATA 
CCACAGATAG TAACCGCACA TGATACTGAC ATTCGCAAGC AATTGCTTAA GCACGAAATC 
ACCCATGAGA ACAATGCCGA TTACCAAAGA TGTTTAGCGC TACTGTATCA ACAAACCAGA 
GACATGAAAG AAGCCAAAAC CTGCTGGCAG AATGTTTGCC GTATTGCACC TACCAAAGAT 
TCTTGGCTCT CGCTCGCACG CATACAAGAG CAACTTGGCG AACAAGGTCA TGCTAATCAA 
AGTTATCGTC AGGCTGTGAC TCTATAA
 
Protein sequence
MIKVLIFFGI ILLGLCISPW IVGNTGYVYI AAGDYQLETS LAFGIIMLIV FYALFQVLEW 
LVITVINLLL RSRFIPHQWR RRSAKKHTLM GALAIAEEDW PAAERAMIKG ADNGELPALN 
LLAAARAAQH QNKTAERDQY LARAETQPLA ANAVATTRTR YLLKQGEFTL ARAELDKLAP 
TSKSKAPVLK LALELYRAQQ DWEALKLLLP ILKKRQILDD IQLNSLSVET HSALLQTASL 
KGEDALEQCW QWLSRDERNQ SEFLAIYTMG LCRFNRKEQA IKLLSKKLRS SPESALLEVI 
PQIVTAHDTD IRKQLLKHEI THENNADYQR CLALLYQQTR DMKEAKTCWQ NVCRIAPTKD 
SWLSLARIQE QLGEQGHANQ SYRQAVTL