| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4305 |
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| Symbol | |
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| ID | 1171910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4482896 |
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| End bp | 4483618 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346031 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein |
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| Protein accession | NP_719830 |
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| Protein GI | 24375787 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTGTT ATCTTAGACC GCAGAATATT CGCGCGATTA GTTTTGATCT CGACGACACC
TTATACGATA ACGAACCTCA CATTATCAAT GCCGAAGCCG AGTTAATGCA GTTTTTGCAT
CAGGCTTTTC CGTTGACACA AGCTTGGCAG CCGCAGCAGT GGCGACGACT CAAATTACAG
CTGCTACAGC AAAATCCGGC CCTAGCCCAT GATACTTCAG CGGCAAGAAT CGCCACACTC
CACCATGGTT TATCACTCCT AGGTTACAGC GAGTCGGAGG CGAAACGCGG CGCAGAGGAA
GGTTTGGCCT GTTTCTATTT TCATCGCAGC CATTTTCACG TTTCAGACGA GGTCTTGGCA
CTACTCTCGC GCTTGTCGGC CCATTTTAGG CTGATTGGGA TCACCAATGG TAATGTGGAT
GCCGAGCGGG TTGGCTTAGG TGAAGTATTT GAATTTGTGC TGCATCCGGG AAGCGGTGTG
CGGATGAAGC CAGCAAAAGA TATGTTTTCA GAGGCTTGTG AACGCCTAAA TATCGGCTTA
GAACAGTTGT TGCATGTTGG CGACAGTATG AATGCTGATG TTCGTGGCGC GCGCTTGGCG
GGATGTCAAT CGGTTTGGTT AAATCCCAGT TTTGGCCGCG TGGCATCGTT GCCTATTGCA
GCACTCTTGC CCCATATGGA AATAGCCACA CTTGATTCAT TGCTAGAGAT GTTATTGCCT
TGA
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| Protein sequence | MRCYLRPQNI RAISFDLDDT LYDNEPHIIN AEAELMQFLH QAFPLTQAWQ PQQWRRLKLQ
LLQQNPALAH DTSAARIATL HHGLSLLGYS ESEAKRGAEE GLACFYFHRS HFHVSDEVLA
LLSRLSAHFR LIGITNGNVD AERVGLGEVF EFVLHPGSGV RMKPAKDMFS EACERLNIGL
EQLLHVGDSM NADVRGARLA GCQSVWLNPS FGRVASLPIA ALLPHMEIAT LDSLLEMLLP
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