Gene SO_4297 details

Gene Information

• Locus tag: SO_4297
• ID: 1171902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4475715
• End bp: 4476440
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637346023
• Product: uridine phosphorylase, putative
• Protein accession: NP_719822
• Protein GI: 24375779
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG2820] Uridine phosphorylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTC AACCCCATAT TCTCGTCGCG CCCCACCAAG TCAGTGAAAA AGCCGTCGTC 
TGCGGCGAGC CTAATCGAGT CAACCGCATC GTGGCGCATC TAACTGATGT CGAATCCTTG 
GCGGATAACC GCGAGTTTCG ACTGATGCGG GGCCGTTATG GCGACACTAT CGTCACCGTT 
TGCAGCACAG GTATTGGCGC GCCCTCGGCG ATCATTGCCC TTGAGGAACT GTATCAATGC 
GGTGTAAAAC AACTTATCCG CATCGGCTCT GCTGGTGCGC TACAACCGCA AATAGCCATA 
GGCGATGTGA TTATTGCCGA AGCCGCCGTA CGTGATGATG GCGGCTCTGC CAGCTATGTA 
AAGCCCGGTT TTCCGGCCTA TGCCAATCAT CGTTTGGTCG GCAAACTGCA AGCATACTGC 
GCGCAGCATC ATATATGTGC CCATAGCGGC GTAGTGCGCT CCCACGACAG TTTTTATACC 
GATCAAGAAC AGGACCTCTG CCACTATTGG CATCGTCAAG GCGTGCTCGG GGCAGATATG 
GAAACCGCTG CGTTATTCAC CGTCGGCCGA CTGCGCCAAC TTGAAGTGGC GGCAATACTC 
ACCAACGTAG TGCTGTTTGA TCAGGATGTT AAAGCAGGAG TTAATGACTA TGTAGCATCG 
TCCAAGGCAA GCGCCCAAGG TGAGCAACAT GCCATTTTAG CCGCGCTCAA CGCGCTGTGT 
GATTAA 

 

Protein sequence

MSIQPHILVA PHQVSEKAVV CGEPNRVNRI VAHLTDVESL ADNREFRLMR GRYGDTIVTV 
CSTGIGAPSA IIALEELYQC GVKQLIRIGS AGALQPQIAI GDVIIAEAAV RDDGGSASYV 
KPGFPAYANH RLVGKLQAYC AQHHICAHSG VVRSHDSFYT DQEQDLCHYW HRQGVLGADM 
ETAALFTVGR LRQLEVAAIL TNVVLFDQDV KAGVNDYVAS SKASAQGEQH AILAALNALC 
D