Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4290 |
Symbol | pstA |
ID | 1171895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4469229 |
End bp | 4470065 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637346016 |
Product | phosphate ABC transporter, permease protein |
Protein accession | NP_719815 |
Protein GI | 24375772 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACGA GAAAGCGCAA AGACAGGCTG CTTTATTGCG CCATTTGGGG CTCAGCAGGG ATAACAATTC TGTTCTTACT ATGGGTCGTT TGGCACATTC TTGCTAATGG CCTAAGCCAT GTAAGCTGGG AATTTATTAC GGGTGCTTAC ACGCGAATAG GAGAGATATC GGGTATTTGG GCGATGATAG TCTCAACCGT TTACATGGTA TTACTCTCAC TTACATTTGC AGCACCGATT GGCATCATGA CCGCAATTTA TTTAACAGAA TATGCCTCCC CTGTTAGTAA AGTCGTTAGA GTCATTCGTT TTTGTACCGA GTCATTAGCG GGTATACCCT CTATAGTTTA CGGCCTTTTT GGCATGACTT TTTTTGTCAC ACAACTAGGT CTTGGATTTT CAATTTTGTC AGGCGCGCTC ACCCTCGCTA TGCTGATTTT ACCAGTCATT ATTCGCACCA CAGAAGAAGC CTTGATGTCA GTACCTATGA GCTATAGAGA AGGTGGCTAT GCATTAGGTT GCAGTAAAAT TTATATCATT TGGCGATTGA TTTTACCCAG TGCTTTACCC GGTATAGTGA ACTCTATCAT CTTAAGTACT GGCCGTGTCG TCGGGGAGTC GGCCCCAGTA TTTTTGACTG CAGGAATGGT GACTCAAATT CCTGAATCAG TTATGGACTC AGGCAGAACA TTGACCGTTC ATTTATATAA ATTAACGCAA GAGTTATTTA CCCAAAATGA ATGGGATCAA GCTTATGCAA CTGCGACCAT TTTGATTGTA TTGGTGCTAA TGCTAAACCT AGCAACCAAA CTCATTGCAA CTAAATTAAA CAAATAA
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Protein sequence | MLTRKRKDRL LYCAIWGSAG ITILFLLWVV WHILANGLSH VSWEFITGAY TRIGEISGIW AMIVSTVYMV LLSLTFAAPI GIMTAIYLTE YASPVSKVVR VIRFCTESLA GIPSIVYGLF GMTFFVTQLG LGFSILSGAL TLAMLILPVI IRTTEEALMS VPMSYREGGY ALGCSKIYII WRLILPSALP GIVNSIILST GRVVGESAPV FLTAGMVTQI PESVMDSGRT LTVHLYKLTQ ELFTQNEWDQ AYATATILIV LVLMLNLATK LIATKLNK
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