| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4265 |
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| Symbol | hsdM-2 |
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| ID | 1171868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4441110 |
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| End bp | 4442723 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345990 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | NP_719792 |
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| Protein GI | 24375749 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA CAAGCAGCAA CAGCGATATC GTCCAAAAAC TGTGGAACCT GTGTGATGTC
CTGCGCGACG ACGGCATTAA CTATTCCGAT TACGTTACCG AACTGGTGCT ATTACTGTTT
ATCAAAATGG TGCACGAAAA TACCGAGGCA GGTTTACTCA ATAAACACAC CTTGCCAACC
GGCTGCCGCT GGACCGACTT AAACGATAAA GATGGCCTCA ACCTACTCGA TGATTACAAA
CGCATTTTAC TCACCCTATC GACGGGCAAA GACAGCGAAG GCAATACCCT ACACGCCGAT
CCGCTGATTT TAGCCATTTA TGCCGATGCC CAAACCCGCC TGCGTGAGCC ACGCCATTTA
AAGCAGCTGA TAAAATCACT GGATTCGATT GACTGGTTCA GCGCCCAAAA AGACGGTTTA
GGTGACTTAT ACGAAGGCTT GTTAGAAAAA AACGCCAACG AGACCAAATC CGGCGCGGGC
CAATACTTTA CCCCGCGTGC CTTGATTGAC TCTATGGTGC GGGTCATTAA CCCACAAGCG
GGCGAAGTGA TTCAAGATCC CGCCGCGGGT ACTGCTGGCT TTTTAATTGC CGCCCATGAA
TTTATCAAAA ATGCCGACAA TTACGATGAT CTCACCTTAA AAGAAATTGA ACACCTGCGG
AACAAGGCGT TCATTGGCGT TGAGCTAGTG CCATCAACCC GCCGTTTAGC ATTGATGAAC
TGTTTACTCC ATGGCATGGA AGGTGACGAT GAAGGCGTAG TGCATTTAGG CAATTCTTTG
GGTCAAGTCG GCATGAGTTT ACCCAAGGCT GATATTATCT TGGCTAACCC GCCTTTTGGC
ACCAGTAAGG GCGGCGATGC GTCCATCACC CGTGACGACT TAACCTATCC CACCAGTAAC
AAACAGCTGG CGTTTTTACA GCACATCTAC CGCAACCTAA AGCCTGGTGG CCGCGCCGCC
GTGGTATTGC CCGATAACGT CTTGTTTGAG GCGGGCGTCG GTACTGACGT GCGCCGCGAC
TTAATGTACA AGTGCAACCT TCATACGATT TTACGTCTGC CGACAGGTAT CTTCTACGCC
GCTGGCGTGA AGACTAATGT GCTCTTCTTC ACTAAGGGAT CAGAGGCCGA CAAACTACAA
GAAGAAAACT GCACCACCAA TACCTGGGTG TATGACTTGC GTACCAACAT GCCAAACTTT
GGTAAACGCA CCCCCTTTGG TGAGCAACAC TTAACCCCGT TTGAAGCTGT TTATGACCCG
TCTAGTCATT CCCGCGAAGG CGGGAATCCA GATCTTTCAG CAAGGAAAGA AGGTGAATGG
TCGTTTAATG CGGAAGCCGT CGAAATCGAA ACGACCGAAG TCAATCAAGG CATAGATGAA
CGCCTAGCCA AAAGCCGCTG GCGCGTATTC AGTCGTGAAT TTATCCGTGA TACTAAGGGT
GACTCGCTAG ATATCTCATG GCTAAAAGAT AGCAACAGCG TCGATGCTGC GGATTTAGGT
ACACCAGAAG AGTTGGCGGG TGAAGCAATG ACAGAGCTTA AAGGTGCATT GGCCGATCTT
GAAGCTTTAA TGAAATCACT AGGTGCTGAG TTAAAAACTG AGGTGAAGGG ATGA
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| Protein sequence | MSITSSNSDI VQKLWNLCDV LRDDGINYSD YVTELVLLLF IKMVHENTEA GLLNKHTLPT
GCRWTDLNDK DGLNLLDDYK RILLTLSTGK DSEGNTLHAD PLILAIYADA QTRLREPRHL
KQLIKSLDSI DWFSAQKDGL GDLYEGLLEK NANETKSGAG QYFTPRALID SMVRVINPQA
GEVIQDPAAG TAGFLIAAHE FIKNADNYDD LTLKEIEHLR NKAFIGVELV PSTRRLALMN
CLLHGMEGDD EGVVHLGNSL GQVGMSLPKA DIILANPPFG TSKGGDASIT RDDLTYPTSN
KQLAFLQHIY RNLKPGGRAA VVLPDNVLFE AGVGTDVRRD LMYKCNLHTI LRLPTGIFYA
AGVKTNVLFF TKGSEADKLQ EENCTTNTWV YDLRTNMPNF GKRTPFGEQH LTPFEAVYDP
SSHSREGGNP DLSARKEGEW SFNAEAVEIE TTEVNQGIDE RLAKSRWRVF SREFIRDTKG
DSLDISWLKD SNSVDAADLG TPEELAGEAM TELKGALADL EALMKSLGAE LKTEVKG
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