Gene SO_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4260 
Symbol 
ID1171863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4436455 
End bp4437174 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content41% 
IMG OID637345985 
Producthypothetical protein 
Protein accessionNP_719787 
Protein GI24375744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGA ATTATGAACA CTACCTAAGT CACTACAGCA AAGTGATGGT TGTCAGAATT 
GATCTACATC CACACCAGTT TTCTGCTGAT AATAATCAAA TTTCTCAGTT TCTTGATCTG 
CAAGTCGAAA AGCTATCAAA GCAATACAAA TGCAAAGTGC AATACCTTTG TGCCAGAGAG 
CGACATCATT CAGAAACGCA ACACTATCAT GTTGCACTCA TGCTTAGCGG ACACAAGATC 
CATTATCCAC ACAAGCTGTT AAATCAGCTT AAATCACAGT GGGATCGTGC TGGTGGAACG 
GCTTCACTAG TTGATAGCCC TTTCAACATT ATGCGCCGTG GAAATAAGCC ATCACTCAAG 
AATGCCATTT ACCGCCTTAG TTACTTTGCG AAAGCATTTA CAAAGGAGCT CAATATCAAA 
GCGCGCACGT TTCTCAGCAA TAAGGTCAAG CCATCAGCAA CATTTGATGA TACCAAAGAC 
ATTCTCTTGG TTAACCCTTT GATCACCTTT GAAATGAATC AGCGAAAGAA GAAACGAGAA 
AACACTGATA GCACAGTAAA GGCTATCAAT AACAGAAGGT GGACAACATT TGCTTGGTTT 
AACGAGCTAA GCCATGCCCA GCAACTCAAA GAATCCATTA GCTCGAGAAC ATCAAGTTTA 
CATCACATAG TGGATCAGCT TTTGAGTGGA TCACAGCTTC AGCACCCTAT GAACCGATAA
 
Protein sequence
MTQNYEHYLS HYSKVMVVRI DLHPHQFSAD NNQISQFLDL QVEKLSKQYK CKVQYLCARE 
RHHSETQHYH VALMLSGHKI HYPHKLLNQL KSQWDRAGGT ASLVDSPFNI MRRGNKPSLK 
NAIYRLSYFA KAFTKELNIK ARTFLSNKVK PSATFDDTKD ILLVNPLITF EMNQRKKKRE 
NTDSTVKAIN NRRWTTFAWF NELSHAQQLK ESISSRTSSL HHIVDQLLSG SQLQHPMNR