Gene SO_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4257 
Symbol 
ID1171860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4433260 
End bp4434123 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID637345982 
Producthypothetical protein 
Protein accessionNP_719784 
Protein GI24375741 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAAA GCATGACAGC CTACGCTCGC ATTGAGCACA AAGCACAATG GGGCACTGCC 
TCTTGGGAAA TTCGCTCAGT TAACCAGCGT TATCTCGAAA CTTACCTTCG CCTACCCGAA
CAATTTCGCA GTTTTGAGCC AGTGCTGCGC GATCGCCTAC GCAACCGCTT AAGCCGCGGT
AAAGTTGAGG TGAACTTACG CTACGAGTTA GCCGACAATA GCAATAACGA ACTTAAATTA
AATCAAGGGT TAGCCAAACA GCTGCTCGAC GCTGCCAGTT GGCTCAAACA AGAAGCCGGA
CAAGGCGAAG TCAACCTCAC CGATATTTTG CGCTGGCCAG GTGTACTCTC GAGTGCTGAG
CAAGATATGG ACGCAATTGG CGCCGATTTA ATGACCGCAT TTGACTTAGC TATCGACCAA
TTTATCGAAG CCCGTGGCCG TGAGGGCGCA GCCATCAAAG ACATGCTGCT AAGTCGTTTA
GATGGCGTCA GCGAGCAAAT CGCCATCGTG CGTGAGCATA TGCCTAAAGT CATGGAATAT
CAGCGTGATA AACTCACCAA CCGCCTCGCT GAAATTAAGG GTGAGCTCGA TCCTGCTCGC
ATCGAGCAAG AAATGATTCT TTTAGCCCAA AAACAAGATG TCGCCGAAGA AATGGACAGA
CTCGAAGCCC ACGTTAACGA AGCCCGTCGC ATCCTCAAAA AAGGCGGCAG TGAAGGTCGT
CGTTTAGATT TTATGATGCA AGAATTTAAC CGCGAATCGA ACACCCTAGC CTCTAAATCC
ATCAGCACCG AAATCACAGC CGCCGCGGTT GATCTTAAAG TTCTTATCGA GCAGATGAGA
GAGCAGATCC AGAATGTGGA ATAA
 
Protein sequence
MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRNRLSRG 
KVEVNLRYEL ADNSNNELKL NQGLAKQLLD AASWLKQEAG QGEVNLTDIL RWPGVLSSAE
QDMDAIGADL MTAFDLAIDQ FIEARGREGA AIKDMLLSRL DGVSEQIAIV REHMPKVMEY
QRDKLTNRLA EIKGELDPAR IEQEMILLAQ KQDVAEEMDR LEAHVNEARR ILKKGGSEGR
RLDFMMQEFN RESNTLASKS ISTEITAAAV DLKVLIEQMR EQIQNVE