Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4248 |
Symbol | radC |
ID | 1171852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4425276 |
End bp | 4425953 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345974 |
Product | DNA repair protein RadC |
Protein accession | NP_719775 |
Protein GI | 24375732 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATTA AGGATTGGCC AGAGGGAGAA GGGCCGCGGG ATAAGTTATT GCTAAAAGGC GCCAGCCATC TCTCGGATGC AGAATTGCTG GCGGTGTTGC TGCGTAATGG CCTGTCGGGA CTGAACGCCG TAGACCTTGC TCGTTCACTT ATTCAAGAAT TTGGTGGCTT AAGAAGCTTA CTTTGCGCAC CAAAGCATCA GGTGTGTCGA CTTCCGGGCG TGGGACCTGT AAAATACGCC CAGCTTCAAG CCGCGGCTGA ATTAGCGCGA CGTGTGGCAC AAGAAAACCT GCAGAGAGGT CAGGTTTTGA CAAATCCCGA TTTAACTCGG GATTATTTAA TGAGACAATT AGCTGACCGC TCCTATGAAG TGTTCGCAAT TTTGCTGCTG GATAGCCAGC ATAGAGTGAT TCAGTTCGTC GAATTATTCC GCGGAACAAT AGATTCAGCC TCAGTATACC CACGTGAAGT GGTAAGCTTA GTGCTGGAAA AAAAGGCTGC TGCCGTCATA GTGTGTCACA ATCATCCGTC TGGTATTGCC GAGCCCAGTC AGGCTGACAG ACGAATAACT GAGCGATTAA AAAATGCGTT GGCAACCATA GATGTATCCC TATTGGATCA TATGGTTGTT GGTGATAGAG AGATAGTTTC CTTCGCGGAA CGAGGCTGGA TTAATTAA
|
Protein sequence | MAIKDWPEGE GPRDKLLLKG ASHLSDAELL AVLLRNGLSG LNAVDLARSL IQEFGGLRSL LCAPKHQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN
|
| |