| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4243 |
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| Symbol | rarD |
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| ID | 1171847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4421545 |
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| End bp | 4422429 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345969 |
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| Product | rarD protein |
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| Protein accession | NP_719770 |
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| Protein GI | 24375727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATA CTGAATACCG CAAAGGGATC CTGCTCGCCG TCAGTGCTTA CTGTATGTGG
GGATTTGCGC CCTTATATTT CAAACTGCTT CATCATGTTT CTGCGACCGA AATTTTATTG
CATCGGGTGA TCTGGTCATT TGTATTTATG GTGATCATCA TGATGTTTAT TGGCGGTTTT
GGCAAACTGC GCCAACTGTT TAAACAACCA AAACAACTGA TTGTACTGAC TATCACCTCT
CTGCTAATTG CTGGTAACTG GCTGCTGTTC ATTTGGGCTG TCAATAATGA TCATATGCTC
GATGCTAGCT TAGGCTACTT TATTAACCCA TTGCTCAATG TGTTGCTGGG CATGCTGTTT
TTAGGGGAAA GATTACGTAA GCTGCAGTGG TTTGCCGTTG CGCTAGCCAG TGCAGGCGTG
CTAATTCAGT TGATTTCATT TGGCTCAATT CCCATTGTCT CCCTCGCGTT AGCTGGCACC
TTCGGGCTAT ATGCGCTACT GCGAAAAAAG GTCAATGTGG ATGCGAAATC AGGGCTGTTA
GTGGAAACCG CTATTCTGCT ACCGGTCGCA TTAGTGTATC TCGTCGCAAC CCTAGATAGC
GCCACAGCCA ATATGCTCAC CAACGATTGG CACCTTAACT TATTGTTGAT GGCCGCAGGA
ATTGTCACCA CCATTCCACT GTTGTGTTTT GCGGGCGCTG CTGTGCGCAT TCCATTGTCT
ATGCTAGGTT TTTTCCAATA TATCGGCCCG AGTATTATGT TTATTCTCGC GGTAACCTTG
TTCAATGAAC CCTTTGATGC CGAGAAAAGC ATCACCTTCG GCTTTATCTG GAGCGCACTG
CTGGTGTTCA CCTTCGATAT GGCCTATAAA CGCAAAACGT CGTAA
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| Protein sequence | MPDTEYRKGI LLAVSAYCMW GFAPLYFKLL HHVSATEILL HRVIWSFVFM VIIMMFIGGF
GKLRQLFKQP KQLIVLTITS LLIAGNWLLF IWAVNNDHML DASLGYFINP LLNVLLGMLF
LGERLRKLQW FAVALASAGV LIQLISFGSI PIVSLALAGT FGLYALLRKK VNVDAKSGLL
VETAILLPVA LVYLVATLDS ATANMLTNDW HLNLLLMAAG IVTTIPLLCF AGAAVRIPLS
MLGFFQYIGP SIMFILAVTL FNEPFDAEKS ITFGFIWSAL LVFTFDMAYK RKTS
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