Gene SO_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4242 
Symbol 
ID1171846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4420864 
End bp4421328 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID637345968 
Producthypothetical protein 
Protein accessionNP_719769 
Protein GI24375726 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC CCATTCAAGC CGAAGTACTC AAGCGCGTTG CTGAAGTATT TGATCAGCAT 
GTGCCTTTTC ATAATTTATT GGGTCTGGAC ATCAAACGCT ACGATATCGA TGGGGTTGAA 
GTGGCGATTA ATATGAAGCC AGAACTCATA GGCAATATTC ACCAGCAAAT TCTCCACGGC 
GGCGTAACTG CGACAGTGCT CGATGTCGTG GGTGGACTCA CGGCCTTTGC GGGCCTCGTT 
GCCAGCCGTG ATGATTGGAC AATTGAAGAA TTACAACAAC GGCTGCAAAC CTTAGGCACC 
ATCGATATGC GAGTCGATTA TCTCAGACCT GGACGCGGAC AGATTTTTAC TGGCACTGGC 
AGTGTGATCC GAGCCGGTAA TCGTGTCTCG GTTTGCCGAA TGGAGTTACA CAATGAACAA 
GGAACCCATA TTGCCTTCGG CACAGGCACT TATATGGTTG GCTAA
 
Protein sequence
MSNPIQAEVL KRVAEVFDQH VPFHNLLGLD IKRYDIDGVE VAINMKPELI GNIHQQILHG 
GVTATVLDVV GGLTAFAGLV ASRDDWTIEE LQQRLQTLGT IDMRVDYLRP GRGQIFTGTG 
SVIRAGNRVS VCRMELHNEQ GTHIAFGTGT YMVG