Gene SO_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4235 
SymbolleuB 
ID1171840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4412471 
End bp4413565 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content51% 
IMG OID637345962 
Product3-isopropylmalate dehydrogenase 
Protein accessionNP_719762 
Protein GI24375719 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AAATTGCAGT ATTAGCGGGT GATGGTATTG GGCCTGAAGT GATGGCCGAG 
GCGCGTAAGG TGTTAAAGGC GGTTGAGGCG CGTTTTGGCC TTAATATTGA ATACACTGAA 
TATGATGTCG GCGGTATCGC TATCGACAAT CATGGTTGTC CATTACCCGA GGCAACGCTT 
AAAGGTTGTG AGGCGGCCGA CGCCATTTTA TTTGGTTCAG TCGGTGGTCC CAAATGGGAA 
AAACTGCCGC CCAATGAGCA GCCTGAGCGC GGTGCACTGC TGCCTCTACG GGGTCACTTC 
GAGCTGTTTT GTAACCTACG TCCCGCTAAA TTGCATGATG GATTAGAGCA TATGTCGCCG 
CTACGCAGTG ATATTTCTGC TCGGGGTTTC GATGTCTTGT GTGTGCGTGA GTTAACCGGC 
GGGATTTACT TTGGAAAGCC TAAAGGCCGC CAAGGTGAAG GTGAGAGCGA AGAAGCCTTC 
GATACCATGC GTTATAGCCG CCGTGAAATT AGCCGTATCG CCCGCATCGC CTTTGAAGCC 
GCCCGTGGTC GGCGTAAAAA AGTCACTTCG GTCGACAAGG CAAACGTCTT GGCTTGCTCG 
GTATTGTGGC GTCAAGTGGT CGAAGAAGTG GCGGTGGATT TCCCCGACGT TGAACTGGAG 
CACATCTATA TCGACAACGC GACCATGCAG TTGCTGCGTC GCCCCGATGA GTTTGACGTC 
ATGCTGTGTT CTAACTTGTT TGGCGACATT CTATCGGACG AAATCGCCAT GCTGACTGGT 
TCTATGGGCT TACTGTCTTC GGCGAGCATG AATAGCACTG GCTTTGGTTT GTTTGAACCC 
GCTGGTGGCA GTGCACCGGA TATCGCCGGA AAGGGTATTG CTAACCCGAT TGCACAAATT 
TTGTCTGCCG CATTGATGCT ACGCCACAGC TTAAAGCAAG AAGAAGCGGC GAGTGCGATT 
GAGCGCGCTG TAACTAAGGC GCTGAATTCT GGCTACTTAA CCGGTGAGCT ATTAAGTAGT 
GATCAAAGAC ACAAAGCAAA AACAACCGTG CAAATGGGCG ACTTTATCGC CGATGCAGTC 
AAGGCAGGTG TGTGA
 
Protein sequence
MSYQIAVLAG DGIGPEVMAE ARKVLKAVEA RFGLNIEYTE YDVGGIAIDN HGCPLPEATL 
KGCEAADAIL FGSVGGPKWE KLPPNEQPER GALLPLRGHF ELFCNLRPAK LHDGLEHMSP 
LRSDISARGF DVLCVRELTG GIYFGKPKGR QGEGESEEAF DTMRYSRREI SRIARIAFEA 
ARGRRKKVTS VDKANVLACS VLWRQVVEEV AVDFPDVELE HIYIDNATMQ LLRRPDEFDV 
MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NSTGFGLFEP AGGSAPDIAG KGIANPIAQI 
LSAALMLRHS LKQEEAASAI ERAVTKALNS GYLTGELLSS DQRHKAKTTV QMGDFIADAV 
KAGV