Gene SO_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4214 
SymbollpxC 
ID1171818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4387250 
End bp4388170 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID637345941 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionNP_719742 
Protein GI24375699 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTC AAAGAACTGT TCAAAAAATG GTGAAAGCTA CCGGAGTCGG TTTGCACTCT 
GGCAATAAAG TCACTTTGAG CATTATGCCC GCACCAGTTA ATACAGGGAT CGTACTCGTG 
CGTACCGATA TGAGTCCTGC CGTTGCTATT CCTGCAAAGG CGGAACAAGT TCGCGAAACC 
ACGATGTGCA CGGCACTTGT CAATGACGAA GGTATTCGTA TTTCGACTAT TGAGCATTTG 
TTTGCAGCCT TAGCGGGTTT AGGCATTGAT AACGCCGTAA TCGAGGTGGA CGCCCCTGAA 
ATCCCAATTA TGGATGGTAG TGCGAGCCCA TTTGTCTTCT TACTTCAGTC TGCGGGTATT 
AAAGAGCAGT CTGCACCTAA GAAGTACTTA AAGATTAAAC GCCCTGTGCG TGTTGAAGAC 
GGTGATAAGT GGGCCGAGCT CAAGCCTTTT AAAGGTTTTA GAGTCAACTT TAAAATTGAC 
TTTGCTCACC CCGAAATTGC TCGCAGCCAA CAGCATGTGG TGATGGACTT CTCTACTTCA 
GCTTTTGTTA AAGACATTAG CCGCGCTCGT ACTTTTGGTT TTATGCGTGA TATTGAGTAT 
CTGCGTGCGA ATAACCTAGC ATTAGGTGGC AGCATGGAAA ACGCAGTTGT ACTTGATGAA 
TATCGCGTCC TCAACCCCGA CGGCCTGCGT TATGAGGATG AGTTCGTTAA GCACAAAATT 
TTAGATGCGT TTGGTGATCT CTACGTGGCA GGACACGCCA TTCTTGGTGA GTTTACTGCC 
TATAAAACGG GTCATGCTCT GAATAACCAG TTAGTACGTG CCTTATTGGC GCAGCAGGAT 
GCGTGGGAGT TAGTGAGCTT TGAGAAAGAA GCCGATGCTC CCGTCAGTTT TACTGTGCCT 
GGCGGTGTGG TTTTCGCCTA A
 
Protein sequence
MIFQRTVQKM VKATGVGLHS GNKVTLSIMP APVNTGIVLV RTDMSPAVAI PAKAEQVRET 
TMCTALVNDE GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI 
KEQSAPKKYL KIKRPVRVED GDKWAELKPF KGFRVNFKID FAHPEIARSQ QHVVMDFSTS 
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI 
LDAFGDLYVA GHAILGEFTA YKTGHALNNQ LVRALLAQQD AWELVSFEKE ADAPVSFTVP 
GGVVFA