| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4211 |
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| Symbol | secA |
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| ID | 1171815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4383076 |
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| End bp | 4385802 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345938 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | NP_719739 |
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| Protein GI | 24375696 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGACCGTAC CCTTAAAGGG
TTACAAAAAG TAGTTAATAA GATTAATGCG CTTGAAGCCG ATTATGAAAA GTTAACCGAT
GAGCAGCTTA AAGCGAAAAC CGCAGAGTTT CGTGAGCGTT TGGCGGCAGG TGCTTCGTTA
GATAGCATCA TGGCTGAAGC GTTTGCGACG GTGCGTGAAG CGTCAAAGCG TGTGTTCGAA
ATGCGTCATT TCGACGTGCA GTTACTTGGT GGTATGGTGC TTGATAGTAA CCGCATCGCT
GAAATGCGTA CAGGTGAAGG TAAAACCTTA ACCGCAACAT TACCTGCTTA CCTTAATGCT
TTGACGGGCA AAGGTGTTCA CGTCATTACC GTCAACGATT ACTTGGCGCG CCGTGACGCG
GAAAACAACC GTCCATTGTT CGAATTCTTA GGTCTGACGG TCGGTATTAA CGTTGCCGGT
CTTGGCCAGC AAGATAAAAA AGATGCCTAT AACGCGGATA TCACCTATGG AACCAACAAC
GAATTTGGTT TCGACTATCT GCGCGATAAC ATGGCGTTTT CACCACAAGA GCGTGTTCAA
CGACCATTAC ACTATGCACT GATCGACGAA GTCGACTCAA TCCTTATCGA CGAAGCGCGT
ACACCATTGA TTATCTCTGG TGCAGCAGAA GATAGCTCAG AACTTTACAT CAAAATCAAC
ACGCTGATCC CTAATCTTAT CCGTCAAGAT AAGGAAGACT CTGAGGAGTA TGTGGGCGAA
GGCGACTACA CCATTGATGA AAAAGCCAAA CAAGTGCACT TTACCGAACG CGGCCAAGAG
AAGGTTGAAA ACCTGCTGAT TGAACGAGGC ATGTTAGCCG AAGGTGACTC ACTTTACTCA
GCTGCTAATA TTTCTTTACT CCATCACGTA AACGCTGCAC TACGCGCTCA TACCCTATTT
GAACGTGATG TCGACTATAT CGTTCAAGAT GGTGAAGTGA TCATCGTTGA TGAGCACACA
GGCCGTACTA TGCCTGGCCG TCGTTGGTCT GAAGGTTTAC ACCAAGCTGT TGAAGCTAAA
GAAGGCGTTC GTATTCAAAA CGAAAACCAA ACACTGGCTT CGATTACCTT CCAAAATTAC
TTCCGCTTAT ACGAAAAATT AGCGGGTATG ACGGGTACTG CCGACACAGA AGCGTTTGAG
TTTCAACATA TCTATGGGCT AGACACTGTC GTAGTGCCAA CCAACCGTCC AATGGTCCGT
AAGGATATGG CGGATTTAGT TTACTTAACC GCTAATGAAA AGTATCAAGC GATTATTAAA
GACATTAAAG ACTGTCGTGA ACGTGGTCAG CCTGTGTTGG TGGGTACGGT TTCTATCGAG
CAATCTGAAC TCTTAGCGCG CTTAATGGTA AAGGAAAAGA TCCCGCACCA AGTACTTAAC
GCTAAGTTCC ATGAAAAAGA AGCCGAGATC GTTGCCCAAG CTGGCCGTAC TGGGGCCGTG
ACGATTGCCA CTAACATGGC GGGTCGTGGT ACCGACATCG TACTAGGCGG CAACTGGAAC
ATGGAAATCG ATGCCCTCGA AAATCCAACA CCAGAACAAA AGGCTAAGAT CAAGGCCGAT
TGGCAATTAC GTCACGATGC CGTTGTCGCC GCTGGTGGTT TACATATTTT AGGTACCGAG
CGTCACGAGT CTCGCCGTAT TGACAACCAG CTGCGTGGTC GTGCGGGTCG TCAAGGTGAT
GCTGGTTCTT CACGTTTCTA CCTCTCTATG GAAGATAGCT TAATGCGTAT CTTTGCCTCT
GATCGTGTCT CCGGCATGAT GAAGAAGCTG GGTATGGAAG AAGGTGAAGC GATAGAACAT
CCATGGGTGT CTCGCGCAAT CGAAAACGCT CAACGTAAAG TTGAAGCACG TAACTTTGAC
ATTCGTAAGC AATTACTTGA ATTTGATGAC GTCGCTAACG ATCAGCGCCA AGTGGTTTAC
GCCCAGCGCA ACGAGTTGAT GGATGCTGAA AGTATTGCGG ACACCATTCA AAACATCCAA
GACGATGTGA TTAGTGCCGT GATTGACCAA TACATTCCAC CACAATCAGT TGAAGAGTTA
TGGGATGTTC CTGGGCTTGA GCAGCGTCTA CATCAAGAGT TTATGCTGAA ACTGCCAATT
CAAGAATGGC TCGATAAAGA AGACGACTTA CACGAAGAAA GCCTGCGCGA GCGTATTATC
ACTTCTTGGT CAGATGCTTA TAAAGCGAAA GAAGAGATGG TCGGAGCCTC AGTATTACGC
CAATTCGAAA AAGCAGTGAT GCTACAAACC CTCGATGGCT TGTGGAAAGA GCACTTAGCG
GCAATGGATC ATTTACGCCA AGGTATCCAC TTACGTGGCT ACGCACAGAA GAATCCAAAG
CAAGAGTATA AGCGTGAGTC TTTTGAACTG TTCCAACAAT TGCTGAATAC GCTGAAGCAT
GATGTGATTA GCGTGTTATC TAAAGTTCAA GTTCAAGCTC AATCGGATGT GGAAGAGATG
GAAGCCCGTC GTCGTGAAGA AGATGCCAAG ATCCAACGCG ACTACCAGCA CGCTGCCGCA
GAAGCATTAG TTGGTGGTAG TGATGAAGAC GACGCTATTG CTGCACATAC ACCGATGATC
CGTGACGGTG ATAAAGTGGG CCGTAACGAT CCTTGTCCTT GTGGTTCAGG CCGTAAGTAT
AAGCAGTGTC ACGGTAAGCT AAGCTAA
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| Protein sequence | MFGKLLTKVF GSRNDRTLKG LQKVVNKINA LEADYEKLTD EQLKAKTAEF RERLAAGASL
DSIMAEAFAT VREASKRVFE MRHFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLTVGINVAG LGQQDKKDAY NADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN
TLIPNLIRQD KEDSEEYVGE GDYTIDEKAK QVHFTERGQE KVENLLIERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF ERDVDYIVQD GEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVRIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMADLVYLT ANEKYQAIIK DIKDCRERGQ PVLVGTVSIE QSELLARLMV KEKIPHQVLN
AKFHEKEAEI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIDALENPT PEQKAKIKAD
WQLRHDAVVA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS
DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIADTIQNIQ DDVISAVIDQ YIPPQSVEEL WDVPGLEQRL HQEFMLKLPI
QEWLDKEDDL HEESLRERII TSWSDAYKAK EEMVGASVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLNTLKH DVISVLSKVQ VQAQSDVEEM
EARRREEDAK IQRDYQHAAA EALVGGSDED DAIAAHTPMI RDGDKVGRND PCPCGSGRKY
KQCHGKLS
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