Gene SO_4203 details

Gene Information

• Locus tag: SO_4203
• Symbol: tatB
• ID: 1171807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4370144
• End bp: 4370593
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637345925
• Product: Sec-independent protein translocase protein TatB
• Protein accession: NP_719731
• Protein GI: 24375688
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGACG GTATCGGCTT TATGGAGCTG CTGCTGATCG GTGTTTTGGG GCTAATAGTT 
CTTGGCCCCG AACGTCTACC GGTTGCAGTA CGTTCAGTAA CCAGTTGGGT CCGCGCGATG 
AAACGCATGG CCAACTCAGT CAAAGAAGAA CTTGAGCAAG AGCTAAAGAT CGAGCAGTTG 
CACGCCGACC TCAAAAAAGC GGAGAGTAAA GGCCTATCTA ACCTCTCACC CGAACTGCAA 
GAATCAATCG AGCAGTTGAA ACAAGCCGCG CAGTCTGTGA ATCGTCCTTA CCAAGTGCAA 
GATACTCCCA GTGCACAGGA TAACCAGATC CACAACCCTG CAAGCCAAAC TGTTTCTACA 
GAGGCGAGCT CTACTTCGGC TTCTTCCGCC CCCAAAAGTG AGTCCATTCA GGGCGAGGAT 
CCCCGTTCTA ACACGAAAGC TAACGGATAA 

 

Protein sequence

MFDGIGFMEL LLIGVLGLIV LGPERLPVAV RSVTSWVRAM KRMANSVKEE LEQELKIEQL 
HADLKKAESK GLSNLSPELQ ESIEQLKQAA QSVNRPYQVQ DTPSAQDNQI HNPASQTVST 
EASSTSASSA PKSESIQGED PRSNTKANG