Gene SO_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4200 
Symbol 
ID1171804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4367548 
End bp4368165 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID637345922 
Producthypothetical protein 
Protein accessionNP_719728 
Protein GI24375685 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAG AAGTGGTGTT ACTTGTCTGC GCCGCTATTG AGATGGGTCT GAAACAACTT 
CAGACCCAAG CGGGCGGCGC CTATGCTCGC CAGCGCCAGT TACATGGCAA AGTATTTCGT 
ATTCAATTAA CCCAACTTAG CTGGCCCATT TACTTAATCT TTGCCAAAGA GATCCAAGTC 
CTGAGCCGCT ATGAAGGCGA TGTTGATGTA AGCCTTCATG CAGATGCAAC CACGCTTTAT 
CACGTGTCCG AAGGCGCCAA CCTGACTGAA CTTATCAAGC AAGATAAACT CAAGCTCGAA 
GGTGATCTGA ATTTACTACA AAGCTTTAGC CAGTATCTAC GCAGCATAGA GTTTGATTTT 
GCTGAGCCAA TATCAAGTTA TTTGGGCGAT GGCCCCACTC ACAAGCTCAT CAGCACTGGC 
CATCAGGCAA AAAGTTTTGC ACTTGAAGTA TTGCGTAAAA CTCGCTCCCA TTTAGGGCAA 
CTCGCTATCG AAGAGTACCG CATCGCGCCC CATCGACTTG AGCTCATTCA TTTTTGCGAT 
CAAATGGATG ATTTAGTGAG CGACACTCGC ACGCTCGAAC AACGGATAGC CAAATTAAGA 
GACCAAATTA AGCCATGA
 
Protein sequence
MPQEVVLLVC AAIEMGLKQL QTQAGGAYAR QRQLHGKVFR IQLTQLSWPI YLIFAKEIQV 
LSRYEGDVDV SLHADATTLY HVSEGANLTE LIKQDKLKLE GDLNLLQSFS QYLRSIEFDF 
AEPISSYLGD GPTHKLISTG HQAKSFALEV LRKTRSHLGQ LAIEEYRIAP HRLELIHFCD 
QMDDLVSDTR TLEQRIAKLR DQIKP