Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4189 |
Symbol | |
ID | 1171794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4358311 |
End bp | 4358772 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345912 |
Product | hypothetical protein |
Protein accession | NP_719717 |
Protein GI | 24375674 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2731] Beta-galactosidase, beta subunit |
TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTCG ATACTTTAGC TAATCGCCAT ATTTATCAAT CACTCAGCCC ACGTATTGCC ACAGCATTAG CACACTTAGC CACAACGGAT TTTAGCCAAC TGCCCGTTGG AAATTACCCT CTCGATGGCG ATAATATTTT CGTGATCGTC AATGATTACC AAACCAAGCC ACAATCGACC GAACCCTTTG AAGTACATCA AAAATATATT GATGTACAGT ATGTGGTCAG TGGTGAAGAA GAGTTTGGTT ATCTGCCATT AGCTGACCAA ACCCCATCAA AGCCTTATTT CGATAAACAC GACTACGCCG AATTTGATTA CGAGTCCAAC AAAAAAAATG CCTCTTATAT TCAGCTTAAA GCAGGCATGT TTGCGCTCTT TTTCCCAGGG GACATGCATA TGCCTGGCAC AAGCGACTCC CCAGTGGCCG TGCGTAAAGT CGTGATAAAA GTGAAAATCT AA
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Protein sequence | MIVDTLANRH IYQSLSPRIA TALAHLATTD FSQLPVGNYP LDGDNIFVIV NDYQTKPQST EPFEVHQKYI DVQYVVSGEE EFGYLPLADQ TPSKPYFDKH DYAEFDYESN KKNASYIQLK AGMFALFFPG DMHMPGTSDS PVAVRKVVIK VKI
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