Gene SO_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4189 
Symbol 
ID1171794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4358311 
End bp4358772 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID637345912 
Producthypothetical protein 
Protein accessionNP_719717 
Protein GI24375674 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTCG ATACTTTAGC TAATCGCCAT ATTTATCAAT CACTCAGCCC ACGTATTGCC 
ACAGCATTAG CACACTTAGC CACAACGGAT TTTAGCCAAC TGCCCGTTGG AAATTACCCT
CTCGATGGCG ATAATATTTT CGTGATCGTC AATGATTACC AAACCAAGCC ACAATCGACC
GAACCCTTTG AAGTACATCA AAAATATATT GATGTACAGT ATGTGGTCAG TGGTGAAGAA
GAGTTTGGTT ATCTGCCATT AGCTGACCAA ACCCCATCAA AGCCTTATTT CGATAAACAC
GACTACGCCG AATTTGATTA CGAGTCCAAC AAAAAAAATG CCTCTTATAT TCAGCTTAAA
GCAGGCATGT TTGCGCTCTT TTTCCCAGGG GACATGCATA TGCCTGGCAC AAGCGACTCC
CCAGTGGCCG TGCGTAAAGT CGTGATAAAA GTGAAAATCT AA
 
Protein sequence
MIVDTLANRH IYQSLSPRIA TALAHLATTD FSQLPVGNYP LDGDNIFVIV NDYQTKPQST 
EPFEVHQKYI DVQYVVSGEE EFGYLPLADQ TPSKPYFDKH DYAEFDYESN KKNASYIQLK
AGMFALFFPG DMHMPGTSDS PVAVRKVVIK VKI