| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4179 |
|---|
| Symbol | |
|---|
| ID | 1171784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4351043 |
|---|
| End bp | 4352254 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637345903 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | NP_719708 |
|---|
| Protein GI | 24375665 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTGG TGCTCACTGG CATTATGCGG TTTTACTACA CCAGTTTCGT GCAGATCCCT
CGGCAGTCGC TTTATAAACC TAAAGTGTCC TGCGTGATCA CTTGTTATGC CGAGGGGGAA
GCGGTCAAAT CGACAATCGA CTCCTTTATC GAACAGGTTT ACGACGGTGA GATTGAGATC
ATTGCCGTTG TCGATGGCGC TGTCCAAAAC GCGCTGACCT ATCAAGTTGC GATGGCGGCG
GCTAAGGCTT GCCAAGTACC AAATCGCAAG GTGGTGGTGT TGCCTAAATG GCAGCGGGGT
GGCCGAGTGT CGACTTTAAA TGCGGGTCTA TCGGTTGCCA CGGGCGAGAT TGTGATCAAT
GCCGATGCTG ATACCTCTTT CGATAACGAT ATGGTGTCGC AGATCGTGCC CTATTTTGAA
GATCCTAATG TGCCCGCTGT AGGGGGGGCA TTAAGGGTGC GCAATGTGAA CGAATCGATA
CTGACTCGAA TGCAAGCGAT TGAGTATCTG ATCTCAATGC AAGGTGGAAA AACCGGACTT
GGGCAATGGA ATCTGCTGAA TAATATTTCT GGGGCTTTTG GTGCATTTAG GCGGACTTTT
TTAATTCAAA TTGGCGGCTG GGATACTCAT ACCGCCGAAG ATTTGGATTT AACCGTGAGG
ATTAAGCAAT ACTTTAAGCG CCACCCTGAC TGGCATATTC CTTTTGCGAC CTTGGCTGTT
GGCCATACAG ATGCGCCAGC CGATCTCAAA ACCTTAGTGT TACAGCGCCT GCGTTGGGAT
GGGGATCTGT TATTTCTGTA TTTTCGTAAA CACTGGCCAG CATTTACGCC TAAGCTGTTA
GGCACTGGGA CTTTTCTCTT TACCTTGCTC TATGGCTTTT TACAGAACGT GTTGATGCCC
TTCGTCATCG TATTTTATTC CTTAGGGATA GTGCTGAGTT ATCCTTGGCA GTTTATTACC
TCGATTTCGC TCACGATTTA TGGCTTTTAT CTTGCCATTT TGGTGTTCTT TTACTTAGTG
GTGCTATTGG CGATTTCGGA GCGACTATCC CAGGATTTAC GTTTAGCCAT CTGGTTACCT
TTATATCCTT TTTATGCGCT GTTTATGCGT TTAGTGTGTC TATTTGCGCT CTTGAATGAA
GTTGTTCGCC GCTCCCATGA AGAAAGCTCA ATGGCGCCAT GGTGGGTTTT GAAACGTGGG
AGAAAGTTTT AA
|
|---|
| Protein sequence | MLLVLTGIMR FYYTSFVQIP RQSLYKPKVS CVITCYAEGE AVKSTIDSFI EQVYDGEIEI
IAVVDGAVQN ALTYQVAMAA AKACQVPNRK VVVLPKWQRG GRVSTLNAGL SVATGEIVIN
ADADTSFDND MVSQIVPYFE DPNVPAVGGA LRVRNVNESI LTRMQAIEYL ISMQGGKTGL
GQWNLLNNIS GAFGAFRRTF LIQIGGWDTH TAEDLDLTVR IKQYFKRHPD WHIPFATLAV
GHTDAPADLK TLVLQRLRWD GDLLFLYFRK HWPAFTPKLL GTGTFLFTLL YGFLQNVLMP
FVIVFYSLGI VLSYPWQFIT SISLTIYGFY LAILVFFYLV VLLAISERLS QDLRLAIWLP
LYPFYALFMR LVCLFALLNE VVRRSHEESS MAPWWVLKRG RKF
|
|---|
| |