Gene SO_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4172 
Symbol 
ID1171778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4344666 
End bp4345217 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content52% 
IMG OID637345897 
ProductDNA-binding response regulator 
Protein accessionNP_719701 
Protein GI24375658 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGC TATTGATTAT TGAAGATGAT CAAGCGCTTG CAGGTATTTT AGCGCGGCGT 
TTGACCCGCC ATGGGTTTGA ATGTCGTTTA AGTCACGATG CCAGTAGTGC CCTGCTGGTG 
GCGCGGGAGT GTTGCCCAAC CCATATCCTG CTGGATATGA AATTGGCCGA GGCCAACGGC 
CTGAGTTTAA TTGTACCGCT GCGTAATTTG TTACCTAAAG TGGTGATGGT GCTACTGACG 
GGCTACGCCA GCATTGCCAC CGCGGTGGAG GCGATTCGTC TTGGCGCGGA TAACTATCTG 
GCTAAACCCG TTGACACCCA AACCCTGTTG GCCGCCTTTG AGCTTGATGT TCATTCCAAT 
AACCTGCAAG AAGATGACGT TGACGACTCG CCGCTTAATC CTAAACGGCT GGAGTGGGAG 
CATATTCAGC AGGTGCTCAA TGCTAATCAG GGCAATGTGT CGGCCACCGC TCGGCAACTG 
GGTATGCACC GCCGTACCCT ACAACGCAAG TTATTAAAGA AACCAGTGAG TGAAACTGGG 
CCGCTCAAGT AA
 
Protein sequence
MKRLLIIEDD QALAGILARR LTRHGFECRL SHDASSALLV ARECCPTHIL LDMKLAEANG 
LSLIVPLRNL LPKVVMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AAFELDVHSN 
NLQEDDVDDS PLNPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG 
PLK