| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4163 |
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| Symbol | hslU |
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| ID | 1171770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4335874 |
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| End bp | 4337196 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345889 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | NP_719692 |
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| Protein GI | 24375649 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCCCG TGAGATTGTC CACGAGCTGG ATGCACATAT CATTGGCCAG
AAAAAGGCCA AGCGCTCCGT TGCCGTCGCC CTACGTAACC GCTGGCGCCG CATGCAACTG
GATGCCGACT TCCGTCAAGA AGTCACCCCA AAAAACATTC TGATGATTGG CCCAACGGGC
GTAGGTAAAA CTGAAATAGC CCGCCGCTTA GCCAAACTCG CCAACGCGCC ATTTATCAAG
GTTGAAGCCA CTAAGTTCAC CGAAGTGGGT TACGTGGGTA AAGAAGTCGA GCAAATCATC
CGTGATTTAA CCGACATCGC CATCAAGCTG ACCCGCGAGC AGCAAATGGG CAAATGCCGC
CAACGCGCAG AAGAACACGC TGAAGAGCGC ATTCTTGATG CCCTGCTGCC TAAGCCGAAA
AACGACTGGG ACGACAGCGA CAGCAACTCC AATACCCGTC AAATCTTCCG CAAGAAGCTG
CGCGAAAGCC AATTAGATGA CAAAGAAATC GATATCGACG TGGCACAGCC GCAAATTGGT
ATTGAAATCA TGTCGCCACC TGGCATGGAA GAAATGACCA ACCAACTGCA AAGCCTGTTT
AAAAACATGG GCCAAGCACC GGCCAAACGT CGCAAGATGA AGATCAAAGA AGCCTTTAAG
CTGTTGATCG AAGAAGAAGC GGCTAAGCTG GTAAATCAAG AAGATTTAAA AGAGCAAGCC
ATTGAATTGG TTGAGCAAAA CGGTATCGTG TTCCTCGACG AAATCGACAA AATCTGTAAG
CGTGGCGAAA CCTCAGGCCC AGACGTTTCT CGCGAAGGGG TACAGCGCGA CCTATTACCT
TTAGTCGAAG GCTGCACGGT AACCACTAAA CACGGCATGG TGAAAACCGA CCATATTCTG
TTTATCGCCT CGGGCGCATT CCAGATGTCG AAACCATCGG ATTTAATCCC TGAGCTACAA
GGCCGTTTAC CGATCCGCGT TGAGCTAGAT GCGCTTACAG CCGATGATTT TAAACGCATT
TTAACTGAGC CACACGCTTC ACTGACAGAA CAATATATCG CACTGATGGC GACCGAAGGT
GTGATTATTG AGTTTACCGA ATCAGGCATT GAGAGCATTG CCAAGGCGGC ATGGCAAGTG
AACGAGCGCA CCGAAAACAT TGGTGCCCGT CGTCTGCATA CCGTGATGGA AAAGCTGATG
GAAGATATCT CCTATGAGGC TTCTGACAAG TCTGGCAGCT CATTTGTGAT TGATGCCGAT
TATGTGAGTG CTCACTTAGA TAATCTGGTT CAAGACGAAG ACTTAAGCCG CTTTATCCTC
TAA
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| Protein sequence | MSEMTPREIV HELDAHIIGQ KKAKRSVAVA LRNRWRRMQL DADFRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVEQII RDLTDIAIKL TREQQMGKCR
QRAEEHAEER ILDALLPKPK NDWDDSDSNS NTRQIFRKKL RESQLDDKEI DIDVAQPQIG
IEIMSPPGME EMTNQLQSLF KNMGQAPAKR RKMKIKEAFK LLIEEEAAKL VNQEDLKEQA
IELVEQNGIV FLDEIDKICK RGETSGPDVS REGVQRDLLP LVEGCTVTTK HGMVKTDHIL
FIASGAFQMS KPSDLIPELQ GRLPIRVELD ALTADDFKRI LTEPHASLTE QYIALMATEG
VIIEFTESGI ESIAKAAWQV NERTENIGAR RLHTVMEKLM EDISYEASDK SGSSFVIDAD
YVSAHLDNLV QDEDLSRFIL
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