Gene SO_4155 details

Gene Information

• Locus tag: SO_4155
• ID: 1171765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4330014
• End bp: 4331819
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637345884
• Product: sensor histidine kinase
• Protein accession: NP_719684
• Protein GI: 24375641
• COG category: [P] Inorganic ion transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component; [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACTT GGTGTAAGAC AATACTTGTG AGCTGTATAT TGAGCATGAT TATGCTTAAT 
TTGTCCTATG CCGATGAAGA CCTTCCCGTT CATGAATTTA AAGTAGGGGT GCTGGCAAAT 
CACGGGGTGT TGCAGGCAAA GCAACGCTGG CAACCTATGA TGGATTACTT GAGTGAAAAT 
GTTCCCAATA GCCGCTTTGA AGTGGTGCCT TTGGATTTCG ATGGCATGCG CAGCCAGTTA 
CTCAGCAATG AGTTGCAATT TATTGTGACA AACCCTGGGC AATATCTGCA CTTAAGTAAT 
AACTTTCCAC TGTCTTGGCT TGCGACTATG AAAAGCCGCA AACATCAAGG CAGTACTTTT 
ACCATTGGCG CAACCATTAT TGTGCGCGCC GATAGTCCTA TCCGCAGCTT GCAGGATTTA 
CGGGGTAAGA ATGTGGTTGC TAGCGATCCG CAGGCGCTCG GTGGCTATCA AGCGGCGATG 
GGATTGCTGC ATAAAATGGG TTATTTACCG GAGCAATTCT TTGGCCAAGT GCGATTTTTA 
GGGTTCCCCC TCGCACCGCT GATCTATCAA GTGCGAGATG GCAGTGCCGA TGCGGCCATT 
GCGCCTTTTT GTACCCTAGA GGAAATGATT GAAACTGGGC TTATCAATAA GGCGGACTAT 
CGGGTAATCC ACCCAACTAA CCCGCCTGGA TATGATTGTG AGGTCAGTAC GCAGCTCTAC 
CCTAATTGGT CATTTGCAGC GGCGGATACG GTTTCACCAT GGATCACCAT GCAAATCACC 
CGCGCTTTGT TTGATTTGCC CGCCGACCAT GTGGCAGCGA TTACCGCCGA TACCTTAGGC 
TGGACAGCGC CAGTAAGCCA ATTAAAGGTA ATTGAATTAT TTAAAGAATT ACAACTGCAA 
GGTGCATCAC CGCCGCTATA TCAAACCGTG TATAAATGGA TGGAGAAAAA CAAAGAGTGG 
GGCGGGGTAT TACTGCTGAT CTTTATTGTG TCGACCATCT ATCACCTGTG GCTCGAATAT 
AAATTTCGCC AAAAAAGCGA GTTTTTAGTC AGCACTGAGC GGCAATTAAA AGACAAGGCA 
TTGCAGCTTG AACGCTTGCA AAGTGCGGCG ATCCTTGGGG AAATTGGCGC AGGTCTGGCC 
CATGAATTAA ATCAACCGAT TGCGGCGATA ACTCAATACA GTGAGGGCGC TATGATACAG 
CTGGAAAGAC TCGGGCACGA TAATCCAGAA CTCTATGATA TTTTGGGCAA AATCAATGCG 
CAGTCGATTC GAGCTGGCGC AGTTGTGCAC CGTATCCGCG GTTTGCTTAA ACGCCGTCAA 
GCGAAGGCTG AGTCGTTGAA TGTGACGCTA GTCGTCAAAG AAGCCTTAGC CTTATTACGC 
CGCGAGTTAG ATCGCGCCGG AGTACAAGTC ACTGTAGAAG TTGAAGGTCA TCCCTACGAA 
TTGATGGGCG ACAACGTTGG CTTAAGCCAA ATGTGGGTCA ATTTGGTGAA AAATAGTCTC 
GATGCCCTAG AAGCCTGCAA GGATAACCGT TCGCGCCAAC TAAGGATTGA GATTTATTAT 
CTACCGAATG AAATCAAAGT ATTAGTCATC GATAACGGCG AAGGATTACA GGGGCAAGCG 
AGCGAATTAA TGGCCTCTTT TGCCTCCACC AAAGATACTG GGCTCGGCTT GGGCTTAGCG 
ATTTGTAAAG ATGTGGTCAG CCGTCACCAC GGCAGTATTG AAATTGAAAA CTGCAAGCAA 
TCGACACAAA CGCCATTGCC TTGGCAGCAA GGCTGTGTGG TGACGGTGAT ATTACCTCGG 
GGCTAG 

 

Protein sequence

MATWCKTILV SCILSMIMLN LSYADEDLPV HEFKVGVLAN HGVLQAKQRW QPMMDYLSEN 
VPNSRFEVVP LDFDGMRSQL LSNELQFIVT NPGQYLHLSN NFPLSWLATM KSRKHQGSTF 
TIGATIIVRA DSPIRSLQDL RGKNVVASDP QALGGYQAAM GLLHKMGYLP EQFFGQVRFL 
GFPLAPLIYQ VRDGSADAAI APFCTLEEMI ETGLINKADY RVIHPTNPPG YDCEVSTQLY 
PNWSFAAADT VSPWITMQIT RALFDLPADH VAAITADTLG WTAPVSQLKV IELFKELQLQ 
GASPPLYQTV YKWMEKNKEW GGVLLLIFIV STIYHLWLEY KFRQKSEFLV STERQLKDKA 
LQLERLQSAA ILGEIGAGLA HELNQPIAAI TQYSEGAMIQ LERLGHDNPE LYDILGKINA 
QSIRAGAVVH RIRGLLKRRQ AKAESLNVTL VVKEALALLR RELDRAGVQV TVEVEGHPYE 
LMGDNVGLSQ MWVNLVKNSL DALEACKDNR SRQLRIEIYY LPNEIKVLVI DNGEGLQGQA 
SELMASFAST KDTGLGLGLA ICKDVVSRHH GSIEIENCKQ STQTPLPWQQ GCVVTVILPR 
G