Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4152 |
Symbol | |
ID | 1171762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4327132 |
End bp | 4327776 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345881 |
Product | hypothetical protein |
Protein accession | NP_719681 |
Protein GI | 24375638 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACC GTATTGATTG CCCTGTTTCT CCGTGGATAA AAGTGGGTTT ATTAAGTTCA GGGTTACTCG GCTTAGCACT TTTAGGCTTT GCAATTGCCG GCCTCAGCAT GACGGTTTTT GCCGCTCAAG GTAACTCAAC TCAGGCGAGT GTCGATGTGA AAACAGCCTT AAGCCCTAAG GTGACGGCAA TGGAGCTGAT CAGTGATGGC TCACCACAGG CGCAATCCAT TGCTCGTGCA GCCCTGTTAT ATGCCAGCTT TTGGGATACC GGTGACCCTA GATTTGCCCA CTGGGCATTA GCGACAGGTT TTATTGACCG CACTCTGCCC CAAGGCCGAG CTCAAGGGAT TAGCGGACCG CTTGAAGCCT CTAAAACCTT TAGGGTGGCA GTGCCTGATC TCTCGGTGAC CGTTGAGCAT TTACTGGTGG TAGGCGATCA CGCCGTAGTA CGCCTCCGCT TTAATGGCCA CTTTACGGGA GTCTTTGGTG AGCAACGTGG TCAAGGGCAA AAAATCGATT TTCGGGCGGT AGATATGTAC CGCGTACGTG AGGGGTTTAT TACCGATAAC TGGCACCTTG AGGATTATCA AACATTGTTT ACCCAACTCG CCTCAAAGGC CGTGACAGCA GGAGCGAAGT CATGA
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Protein sequence | MQNRIDCPVS PWIKVGLLSS GLLGLALLGF AIAGLSMTVF AAQGNSTQAS VDVKTALSPK VTAMELISDG SPQAQSIARA ALLYASFWDT GDPRFAHWAL ATGFIDRTLP QGRAQGISGP LEASKTFRVA VPDLSVTVEH LLVVGDHAVV RLRFNGHFTG VFGEQRGQGQ KIDFRAVDMY RVREGFITDN WHLEDYQTLF TQLASKAVTA GAKS
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