Gene SO_4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4130 
Symbol 
ID1171741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4287991 
End bp4288455 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID637345860 
Producthypothetical protein 
Protein accessionNP_719659 
Protein GI24375616 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT CGAATCTGAT TGTAGTCTGG TCTATTATCG GGATTATCTT GATGCTAGCC 
GAACTCGTGA TACCGGGCGG GATAGTTGTG CTTCTTGGTG CGGCCTGTTT AGTGGTGGCT
GGTGCCTTAG GCATTGGGCT CGTGGAAGGG CTGGTGCAGA GCCTGACACT GTGGTTCATT
TCTGCCATTG TCTTATTGCT TGCCTTTCGG CAAGTCACAC AAAAACTTGT CGGTGGAGAT
TCCCATGTGG ATAACACTGA CGAAGAACTT GATATCTACA ATAAAATCGC CCGCGTTAAG
CAAACCATAG GTCCAGGACA AACTACAGGA AGAGTTGAGT TCCAAGGGAG TGAATGGCCC
GCACTGGGGG ATGGTAGTAT CATTGCGGTG GGGTGTGAGG TCAGGATTAT CTGTCGTGAA
AACATTGCCC TTGTGGTTGA GCCTGTGAAT CAGGCAGCGT CTTAA
 
Protein sequence
MEFSNLIVVW SIIGIILMLA ELVIPGGIVV LLGAACLVVA GALGIGLVEG LVQSLTLWFI 
SAIVLLLAFR QVTQKLVGGD SHVDNTDEEL DIYNKIARVK QTIGPGQTTG RVEFQGSEWP
ALGDGSIIAV GCEVRIICRE NIALVVEPVN QAAS