Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4130 |
Symbol | |
ID | 1171741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4287991 |
End bp | 4288455 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345860 |
Product | hypothetical protein |
Protein accession | NP_719659 |
Protein GI | 24375616 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTT CGAATCTGAT TGTAGTCTGG TCTATTATCG GGATTATCTT GATGCTAGCC GAACTCGTGA TACCGGGCGG GATAGTTGTG CTTCTTGGTG CGGCCTGTTT AGTGGTGGCT GGTGCCTTAG GCATTGGGCT CGTGGAAGGG CTGGTGCAGA GCCTGACACT GTGGTTCATT TCTGCCATTG TCTTATTGCT TGCCTTTCGG CAAGTCACAC AAAAACTTGT CGGTGGAGAT TCCCATGTGG ATAACACTGA CGAAGAACTT GATATCTACA ATAAAATCGC CCGCGTTAAG CAAACCATAG GTCCAGGACA AACTACAGGA AGAGTTGAGT TCCAAGGGAG TGAATGGCCC GCACTGGGGG ATGGTAGTAT CATTGCGGTG GGGTGTGAGG TCAGGATTAT CTGTCGTGAA AACATTGCCC TTGTGGTTGA GCCTGTGAAT CAGGCAGCGT CTTAA
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Protein sequence | MEFSNLIVVW SIIGIILMLA ELVIPGGIVV LLGAACLVVA GALGIGLVEG LVQSLTLWFI SAIVLLLAFR QVTQKLVGGD SHVDNTDEEL DIYNKIARVK QTIGPGQTTG RVEFQGSEWP ALGDGSIIAV GCEVRIICRE NIALVVEPVN QAAS
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