Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4123 |
Symbol | argS |
ID | 1171736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4282919 |
End bp | 4284664 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345855 |
Product | arginyl-tRNA synthetase |
Protein accession | NP_719652 |
Protein GI | 24375609 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC ATATCCAATC ATTACTTGAA CAAACTATCG AATCCTTTAA ACAACAAGGT ATTTTACCTG CGGATTTTGA GGCCCGAATT CAAGTAGATC GAACCAAGGA TAAGAGCCAT GGTGACTTGG CAACCAACGT AGCCATGATG CTAACCAAAG CGGCGGGTAA AAATCCGCGC GAATTAGCGC AGTTGATCAT CGACAACCTT CCCGCCTCCG CTTATGTGGC AAAAGTTGAA ATCGCAGGCC CAGGTTTTAT CAACTTTTTC ATCGATGACA GCGCACTCGC TAACCAGTTA CAAGCCGCCA TTGGCGATGA GCATTTAGGG ATTAAACTGC CCGCGCCACA AACTGTTGTG GTGGATTATT CCTCACCAAA CCTCGCCAAA GAGATGCACG TGGGTCACCT GCGTTCAACC ATCATTGGCG ATAGCGTGGT TCGCACCCTC GAGTTTTTAG GTCACAAAGT CATCCGTCAA AACCATGTAG GCGACTGGGG CACCCAATTT GGTATGTTGC TGGCTTACAT GGAAGAATTA CGTGCAGCCA ATGGCGAGCA AGCCCAATTA GAGTTATCGG ATCTGGAAAC CTTCTACCGC GCCGCCAAAC TGCGTTTTGA CGAGTCTGCC GAATTTGCTA CCCGCGCCCG TCAGCTCGTG GTTGCACTGC AATCAGGTGA TGAGTACTGC AACAAACTGT GGCGCGAATT TAACGATATT TCGCTAAGCC ACTGCCATGA AGTGTACGAG CGTTTAGGTG TGAGTTTAAC CCGCGCCGAT GTCCACGGTG AAAGCGCCTA TAACGCCGAT TTAGAGCAAG TCGTTAACGA TTTAGCTGCC AAAGGTTTAT TGACTGAAAG CAACGGCGCC AAAGTGGTAT TCCAAGAAGA ATTCCGCACT AAAGAAGGCG AGCCACTGCC GGTTATCATT CAAAAAGCCG ATGGTGGTTA CCTGTACGCC ACAACCGACT TAGCAGCTAT GCGTTACCGC TCAAACGTGC TCAAGGCTGA CCGCGTGCTG TATTTTGTTG ATTTACGCCA AGCGCTGCAC TTCCAGCAAG TATTTAGCCT CGCCAAACTG GCCAAGTTTG TCCGCGAGGA TATGTCACTT GAGCACTTAG GCTTTGGCAC CATGAATGGC GAAGATGGTC GTCCATTTAA AACCCGCACT GGTGGCGTGG TGAAATTAGT TGATCTGCTC GACGAAGCCA ACACCCGCGC GCTGGAATTA GTTCGCAGCA AGAATCCAGA TATGGATGAA GCGACACTTG CTGAAATCGC CCGCGTAGTC GGGATCAGCG CAGTGAAATA TGCTGATCTG TCGAAAAACC GCACCAGCGA TTACATCTTC AGCTTCGAGC AAATGCTGAG CTTTGAAGGC AATACCGCGC CTTACCTGTT GTACGCATAC ACTCGCGTAG CGGGCATCTT CAAGCGTGCG ACCGATGTTG ACTTAAGCCA AGCCAAAATC GTACTCGAAC ACGAAAAAGA GAAAGATCTA GGCAACAAAC TGGCGCAGTT TGGTGAAATC CTAAGCCGTG TTGTCGACAA GGGCCAACCA CATGTGCTCT GCGGCTACCT CTATGAATTA GCAGGTGCTT TCTCTAGCTT CTATGAGGCC TGCCCTGTGC TTGCTGCCGA TAATGATGAA CAAAAACACA GTCGTTTACT GCTGTCACAA CTGACGGCGA GCACTCTGCA AAAAGGCCTA AATCTACTAG GTATCGAAAC CCTAGAACGG ATGTAA
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Protein sequence | MKSHIQSLLE QTIESFKQQG ILPADFEARI QVDRTKDKSH GDLATNVAMM LTKAAGKNPR ELAQLIIDNL PASAYVAKVE IAGPGFINFF IDDSALANQL QAAIGDEHLG IKLPAPQTVV VDYSSPNLAK EMHVGHLRST IIGDSVVRTL EFLGHKVIRQ NHVGDWGTQF GMLLAYMEEL RAANGEQAQL ELSDLETFYR AAKLRFDESA EFATRARQLV VALQSGDEYC NKLWREFNDI SLSHCHEVYE RLGVSLTRAD VHGESAYNAD LEQVVNDLAA KGLLTESNGA KVVFQEEFRT KEGEPLPVII QKADGGYLYA TTDLAAMRYR SNVLKADRVL YFVDLRQALH FQQVFSLAKL AKFVREDMSL EHLGFGTMNG EDGRPFKTRT GGVVKLVDLL DEANTRALEL VRSKNPDMDE ATLAEIARVV GISAVKYADL SKNRTSDYIF SFEQMLSFEG NTAPYLLYAY TRVAGIFKRA TDVDLSQAKI VLEHEKEKDL GNKLAQFGEI LSRVVDKGQP HVLCGYLYEL AGAFSSFYEA CPVLAADNDE QKHSRLLLSQ LTASTLQKGL NLLGIETLER M
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