Gene SO_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4123 
SymbolargS 
ID1171736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4282919 
End bp4284664 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content49% 
IMG OID637345855 
Productarginyl-tRNA synthetase 
Protein accessionNP_719652 
Protein GI24375609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAC ATATCCAATC ATTACTTGAA CAAACTATCG AATCCTTTAA ACAACAAGGT 
ATTTTACCTG CGGATTTTGA GGCCCGAATT CAAGTAGATC GAACCAAGGA TAAGAGCCAT
GGTGACTTGG CAACCAACGT AGCCATGATG CTAACCAAAG CGGCGGGTAA AAATCCGCGC
GAATTAGCGC AGTTGATCAT CGACAACCTT CCCGCCTCCG CTTATGTGGC AAAAGTTGAA
ATCGCAGGCC CAGGTTTTAT CAACTTTTTC ATCGATGACA GCGCACTCGC TAACCAGTTA
CAAGCCGCCA TTGGCGATGA GCATTTAGGG ATTAAACTGC CCGCGCCACA AACTGTTGTG
GTGGATTATT CCTCACCAAA CCTCGCCAAA GAGATGCACG TGGGTCACCT GCGTTCAACC
ATCATTGGCG ATAGCGTGGT TCGCACCCTC GAGTTTTTAG GTCACAAAGT CATCCGTCAA
AACCATGTAG GCGACTGGGG CACCCAATTT GGTATGTTGC TGGCTTACAT GGAAGAATTA
CGTGCAGCCA ATGGCGAGCA AGCCCAATTA GAGTTATCGG ATCTGGAAAC CTTCTACCGC
GCCGCCAAAC TGCGTTTTGA CGAGTCTGCC GAATTTGCTA CCCGCGCCCG TCAGCTCGTG
GTTGCACTGC AATCAGGTGA TGAGTACTGC AACAAACTGT GGCGCGAATT TAACGATATT
TCGCTAAGCC ACTGCCATGA AGTGTACGAG CGTTTAGGTG TGAGTTTAAC CCGCGCCGAT
GTCCACGGTG AAAGCGCCTA TAACGCCGAT TTAGAGCAAG TCGTTAACGA TTTAGCTGCC
AAAGGTTTAT TGACTGAAAG CAACGGCGCC AAAGTGGTAT TCCAAGAAGA ATTCCGCACT
AAAGAAGGCG AGCCACTGCC GGTTATCATT CAAAAAGCCG ATGGTGGTTA CCTGTACGCC
ACAACCGACT TAGCAGCTAT GCGTTACCGC TCAAACGTGC TCAAGGCTGA CCGCGTGCTG
TATTTTGTTG ATTTACGCCA AGCGCTGCAC TTCCAGCAAG TATTTAGCCT CGCCAAACTG
GCCAAGTTTG TCCGCGAGGA TATGTCACTT GAGCACTTAG GCTTTGGCAC CATGAATGGC
GAAGATGGTC GTCCATTTAA AACCCGCACT GGTGGCGTGG TGAAATTAGT TGATCTGCTC
GACGAAGCCA ACACCCGCGC GCTGGAATTA GTTCGCAGCA AGAATCCAGA TATGGATGAA
GCGACACTTG CTGAAATCGC CCGCGTAGTC GGGATCAGCG CAGTGAAATA TGCTGATCTG
TCGAAAAACC GCACCAGCGA TTACATCTTC AGCTTCGAGC AAATGCTGAG CTTTGAAGGC
AATACCGCGC CTTACCTGTT GTACGCATAC ACTCGCGTAG CGGGCATCTT CAAGCGTGCG
ACCGATGTTG ACTTAAGCCA AGCCAAAATC GTACTCGAAC ACGAAAAAGA GAAAGATCTA
GGCAACAAAC TGGCGCAGTT TGGTGAAATC CTAAGCCGTG TTGTCGACAA GGGCCAACCA
CATGTGCTCT GCGGCTACCT CTATGAATTA GCAGGTGCTT TCTCTAGCTT CTATGAGGCC
TGCCCTGTGC TTGCTGCCGA TAATGATGAA CAAAAACACA GTCGTTTACT GCTGTCACAA
CTGACGGCGA GCACTCTGCA AAAAGGCCTA AATCTACTAG GTATCGAAAC CCTAGAACGG
ATGTAA
 
Protein sequence
MKSHIQSLLE QTIESFKQQG ILPADFEARI QVDRTKDKSH GDLATNVAMM LTKAAGKNPR 
ELAQLIIDNL PASAYVAKVE IAGPGFINFF IDDSALANQL QAAIGDEHLG IKLPAPQTVV
VDYSSPNLAK EMHVGHLRST IIGDSVVRTL EFLGHKVIRQ NHVGDWGTQF GMLLAYMEEL
RAANGEQAQL ELSDLETFYR AAKLRFDESA EFATRARQLV VALQSGDEYC NKLWREFNDI
SLSHCHEVYE RLGVSLTRAD VHGESAYNAD LEQVVNDLAA KGLLTESNGA KVVFQEEFRT
KEGEPLPVII QKADGGYLYA TTDLAAMRYR SNVLKADRVL YFVDLRQALH FQQVFSLAKL
AKFVREDMSL EHLGFGTMNG EDGRPFKTRT GGVVKLVDLL DEANTRALEL VRSKNPDMDE
ATLAEIARVV GISAVKYADL SKNRTSDYIF SFEQMLSFEG NTAPYLLYAY TRVAGIFKRA
TDVDLSQAKI VLEHEKEKDL GNKLAQFGEI LSRVVDKGQP HVLCGYLYEL AGAFSSFYEA
CPVLAADNDE QKHSRLLLSQ LTASTLQKGL NLLGIETLER M